Accession: P26169
BACTERIOCHLOROPHYLL SYNTHASE 23 KD CHAIN.
Length = 213
Score = 1118 (521.3 bits)
Expect = 3.2e-153
P = 3.2e-153
Identities = 213/213 (100%)
Positives = 213/213 (100%)
Query: 1 MSGAAPAPQDDEPRIGPNAILQTIGVLDRHLGRAERDRVMRLAGVPVPPPDSGMLPESQC 60
MSGAAPAPQDDEPRIGPNAILQTIGVLDRHLGRAERDRVMRLAGVPVPPPDSGMLPESQC
Subject: 1 MSGAAPAPQDDEPRIGPNAILQTIGVLDRHLGRAERDRVMRLAGVPVPPPDSGMLPESQC 60
Query: 61 RAVHQALRVDQGEAAEGLLWLSGLATGDYILANRIPGFAKAIIRVLPGFLGARLLAAAIT 120
RAVHQALRVDQGEAAEGLLWLSGLATGDYILANRIPGFAKAIIRVLPGFLGARLLAAAIT
Subject: 61 RAVHQALRVDQGEAAEGLLWLSGLATGDYILANRIPGFAKAIIRVLPGFLGARLLAAAIT 120
Query: 121 KHAWTFVGSGRFRVESFRPLTFRIDDNPLRADAAERPSCFWHAAVFERLFGTLVWPEVTV 180
KHAWTFVGSGRFRVESFRPLTFRIDDNPLRADAAERPSCFWHAAVFERLFGTLVWPEVTV
Subject: 121 KHAWTFVGSGRFRVESFRPLTFRIDDNPLRADAAERPSCFWHAAVFERLFGTLVWPEVTV 180
Query: 181 EEISCASVSGGPCLFVLHPKGKKTAMPSSVHSG 213
EEISCASVSGGPCLFVLHPKGKKTAMPSSVHSG
Subject: 181 EEISCASVSGGPCLFVLHPKGKKTAMPSSVHSG 213
Accession: P33137
PERIPLASMIC GLUCANS BIOSYNTHESIS PROTEIN MDOH.
Length = 847
Score = 61 (28.4 bits)
Expect = 2.6
P = 0.92
Identities = 11/23 (47%)
Positives = 16/23 (69%)
Query: 45 VPVPPPDSGMLPESQCRAVHQAL 67
+P+ + G LP++ RAVHQAL
Subject: 11 MPIAASEKGALPKTDIRAVHQAL 33
Accession: P42514
HYPOTHETICAL 42.2 KD PROTEIN IN FPTB 3'REGION.
Length = 394
Score = 55 (25.6 bits)
Expect = 5.7
Sum P(2) = 1.0
Identities = 16/50 (32%)
Positives = 24/50 (48%)
Query: 75 AEGLLWLSGLATGDYILANRIPGFAKAIIRVLPGFLGARLLAAAITKHAW 124
A GLL ++GLA +A+ P + + L L L A + +HAW
Subject: 325 ARGLLGVAGLACLAAAVAHLAPWLMRGRLPALGPDLTLILCGALLIRHAW 374
Score = 36 (16.8 bits)
Expect = 5.7
Sum P(2) = 1.0
Identities = 9/15 (60%)
Positives = 10/15 (66%)
Query: 29 RHLGRAERDRVMRLA 43
R L R RDR +RLA
Subject: 47 RDLRRWRRDRGLRLA 61
Accession: P12675
CALPAIN INHIBITOR (CALPASTATIN).
Length = 713
Score = 51 (23.8 bits)
Expect = 5.8
Sum P(2) = 1.0
Identities = 10/32 (31%)
Positives = 19/32 (59%)
Query: 21 LQTIGVLDRHLGRAERDRVMRLAGVPVPPPDS 52
++ +G + L R+ + + G+PVPPPD+
Subject: 192 IEELGKREVTLPPKYRELLDKKEGIPVPPPDT 223
Score = 42 (19.6 bits)
Expect = 5.8
Sum P(2) = 1.0
Identities = 8/30 (26%)
Positives = 16/30 (53%)
Query: 48 PPPDSGMLPESQCRAVHQALRVDQGEAAEG 77
P P +GM+P+ A+ +L + + +G
Subject: 423 PKPATGMVPDDAVEALAGSLGKKEADPEDG 452
Accession: P10662
MITOCHONDRIAL 40S RIBOSOMAL PROTEIN MRP1.
Length = 321
Score = 58 (27.0 bits)
Expect = 6.3
P = 1.0
Identities = 10/23 (43%)
Positives = 15/23 (65%)
Query: 1 MSGAAPAPQDDEPRIGPNAILQT 23
+ G P ++ PR+GP A+LQT
Subject: 97 LQGCIRTPPEECPRLGPEALLQT 119
Accession: P55203
RETINAL GUANYLYL CYCLASE 1 PRECURSOR (EC 4.6.1.2)
(GUANYLATE CYCLASE 2D
RETINAL) (RETGC-1) (ROD OUTER SEGMENT
MEMBRANE GUANYLATE CYCLASE) (ROS-GC).
Length = 1110
Score = 58 (27.0 bits)
Expect = 7.0
P = 1.0
Identities = 13/34 (38%)
Positives = 18/34 (52%)
Query: 69 VDQGEAAEGLLWLSGLATGDYILANRIPGFAKAI 102
V + A G W+SG A +I R+PGF A+
Subject: 366 VARARVAAGGGWVSGAAVARHIRDARVPGFCGAL 399
Accession: P02992
ELONGATION FACTOR TU, MITOCHONDRIAL PRECURSOR.
Length = 437
Score = 57 (26.6 bits)
Expect = 9.1
P = 1.0
Identities = 12/37 (32%)
Positives = 20/37 (54%)
Query: 1 MSGAAPAPQDDEPRIGPNAILQTIGVLDRHLGRAERD 37
M A A + +P IG AI++ + +D ++ ERD
Subject: 208 MGSALCALEGRQPEIGEQAIMKLLDAVDEYIPTPERD 244
Accession: P46461
VESICULAR-FUSION PROTEIN NSF1 (N-ETHYLMALEIMIDE-SENSITIVE
FUSION PROTEIN 1) (NEM-SENSITIVE FUSION PROTEIN 1) (COMATOSE
PROTEIN).
Length = 745
Score = 57 (26.6 bits)
Expect = 9.5
P = 1.0
Identities = 10/27 (37%)
Positives = 16/27 (59%)
Query: 164 AVFERLFGTLVWPEVTVEEISCASVSG 190
++F R F + V+P VE++ C V G
Subject: 229 SIFRRAFASRVFPPELVEQLGCKHVKG 255
Accession: Q02846
RETINAL GUANYLYL CYCLASE 1 PRECURSOR (EC 4.6.1.2)
(GUANYLATE CYCLASE 2D
RETINAL) (RETGC-1) (ROD OUTER SEGMENT
MEMBRANE GUANYLATE CYCLASE) (ROS-GC).
Length = 1103
Score = 57 (26.6 bits)
Expect = 9.7
P = 1.0
Identities = 12/30 (40%)
Positives = 17/30 (56%)
Query: 69 VDQGEAAEGLLWLSGLATGDYILANRIPGF 98
V + AA G W+SG A +I ++PGF
Subject: 361 VAEARAAAGGRWVSGAAVARHIRDAQVPGF 390
Parameters:
B=50
H=1
V=500
-ctxfactor=1.00
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.433 same same same
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 213 10. 58 3 11 22 0.23 32
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 61 (28.4 bits) 1118 (521.3 bits) 11 11
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 5084 9318385 1987497 7313427 17461 29
Database: sp.prot
Release date: unknown
Posted date: 11:35 PM CDT Aug 21, 1997
# of letters in database: 21,210,388
# of sequences in database: 59,021
# of database sequences satisfying E: 9
No. of states in DFA: 565 (56 KB)
Total size of DFA: 111 KB (128 KB)
Time to generate neighborhood: 0.02u 0.02s 0.04t Real: 00:00:00
Time to search database: 15.56u 0.46s 16.02t Real: 00:00:19
Total cpu time: 15.59u 0.65s 16.24t Real: 00:00:20