Accession: P48329
HYPOTHETICAL 20.0 KD PROTEIN IN PETA-PSAM INTERGENIC
REGION (ORF180).
Length = 180
Score = 899 (405.0 bits)
Expect = 3.6e-118
P = 3.6e-118
Identities = 180/180 (100%)
Positives = 180/180 (100%)
Query: 1 MGLNYNQEDFMGLDRFFQDAVSHNNTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEI 60
MGLNYNQEDFMGLDRFFQDAVSHNNTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEI
Subject: 1 MGLNYNQEDFMGLDRFFQDAVSHNNTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEI 60
Query: 61 GAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRA 120
GAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRA
Subject: 61 GAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRA 120
Query: 121 LETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEVA 180
LETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEVA
Subject: 121 LETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEVA 180
Accession: P51591
RUBRERYTHRIN.
Length = 195
Score = 104 (46.9 bits)
Expect = 1.1e-09
Sum P(2) = 1.1e-09
Identities = 25/58 (43%)
Positives = 33/58 (56%)
Query: 121 LETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLE 178
L+ A E E E YP+FA +A E+G EVA AF I K+ET H N + +N+ E
Subject: 91 LKFAAEGEHDELSNLYPSFADVADEEGFPEVAAAFRMIAKAETAHYNRFMKLAKNMEE 148
Score = 96 (43.2 bits)
Expect = 2.5e-05
P = 2.5e-05
Identities = 23/62 (37%)
Positives = 31/62 (50%)
Query: 25 NTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSE 84
+T N + E E E +YP+FA++A G PE+ A F IAK E H KL
Subject: 86 DTLTNLKFAAEGEHDELSNLYPSFADVADEEGFPEVAAAFRMIAKAETAHYNRFMKLAKN 145
Query: 85 LE 86
+E
Subject: 146 ME 147
Score = 50 (22.5 bits)
Expect = 1.1e-09
Sum P(2) = 1.1e-09
Identities = 12/40 (30%)
Positives = 19/40 (47%)
Query: 45 YPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSE 84
Y F+ AR+ G +I +F A+ E HA+ K +
Subject: 27 YTYFSSTARKEGYVQISNIFLETAENEKEHAKRFYKFLKD 66
Accession: P24931
RUBRERYTHRIN.
Length = 191
Score = 93 (41.9 bits)
Expect = 6.7e-05
P = 6.7e-05
Identities = 22/50 (44%)
Positives = 28/50 (56%)
Query: 25 NTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMH 74
+T AN +S E +E MYP+FA IAR G EI +F +IA E H
Subject: 82 DTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFH 131
Score = 72 (32.4 bits)
Expect = 0.00049
Sum P(2) = 0.00049
Identities = 14/35 (40%)
Positives = 22/35 (62%)
Query: 131 ESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKH 165
E + YP+FA++A E+G E+A F +I +E H
Subject: 97 EYTEMYPSFARIAREEGYEEIARVFASIAVAEEFH 131
Score = 44 (19.8 bits)
Expect = 0.00049
Sum P(2) = 0.00049
Identities = 12/36 (33%)
Positives = 18/36 (50%)
Query: 45 YPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTK 80
Y F A++ G +I +F A +E HA+ L K
Subject: 27 YNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFK 62
Accession: P53278
HYPOTHETICAL 92.7 KD PROTEIN IN ASN2-PHB1 INTERGENIC
REGION.
Length = 816
Score = 73 (32.9 bits)
Expect = 0.069
P = 0.067
Identities = 17/66 (25%)
Positives = 34/66 (51%)
Query: 62 AMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRAL 121
A++D I +E +H L L ++ + K A+ E K + +++QID + + + +R
Subject: 420 AVYDKINYDEKIHQAWLADLRAKEKDKYDAKNKEYKEKLQDLQNQIDEIENSMKAMREET 479
Query: 122 ETALEV 127
+EV
Subject: 480 SEKIEV 485
Accession: P11929
BLASTODERM SPECIFIC PROTEIN 25D.
Length = 741
Score = 71 (32.0 bits)
Expect = 0.13
P = 0.12
Identities = 19/71 (26%)
Positives = 39/71 (54%)
Query: 77 LLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRALETALEVETIESQKTY 136
+L + YSELE + + + +++ +I ++ S+ LR+ L ++E+ T + T
Subject: 621 MLEQQYSELEAEAAQLRSSSIQMLEEKAQEISSLQSEIEDLRQRLGESVEILTGACELTS 680
Query: 137 PAFAKLAAEQG 147
+ A+L+AE G
Subject: 681 ESVAQLSAEAG 691
Accession: P43314
BACTERIOFERRITIN (BFR).
Length = 159
Score = 59 (26.6 bits)
Expect = 0.22
Sum P(2) = 0.20
Identities = 13/33 (39%)
Positives = 19/33 (57%)
Query: 142 LAAEQGNMEVATAFEAIVKSETKHANWVKRALE 174
L E+ + AT FE IV E KH ++++ LE
Subject: 107 LCREKQDSTTATLFEQIVADEEKHIDYLETQLE 139
Score = 37 (16.7 bits)
Expect = 0.22
Sum P(2) = 0.20
Identities = 13/54 (24%)
Positives = 25/54 (46%)
Query: 56 GQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDA 109
G E+ A + +E HA+ +T L+ + + L + R+ T+ Q +A
Subject: 36 GFTELAEHTRAESFDEMRHAEAITDRILLLDGLPNYQRLFSLRIGQTLREQFEA 89
Accession: P46253
ACYL-[ACYL-CARRIER PROTEIN] DESATURASE PRECURSOR (EC
1.14.99.6) (STEAROYL-ACP DESATURASE).
Length = 393
Score = 66 (29.7 bits)
Expect = 0.60
P = 0.45
Identities = 15/40 (37%)
Positives = 23/40 (57%)
Query: 140 AKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEV 179
A+LA E G+M++A +I E +H + +E LLEV
Subject: 237 ARLAKEHGDMKLAQICGSIAADEKRHETAYTKIVEKLLEV 276
Accession: P98171
RHO-GAP HEMATOPOIETIC PROTEIN C1 (P115).
Length = 946
Score = 62 (27.9 bits)
Expect = 2.4
P = 0.91
Identities = 13/59 (22%)
Positives = 30/59 (50%)
Query: 97 KRLVSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAF 155
K L +T+++ ++ VASD + + +T+ E+++S + P + +G + F
Subject: 381 KTLKATLQALLEVVASDDGDVLDSFQTSPSTESLKSTSSDPGSRQAGRRRGQQQETETF 439
Accession: P33799
RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN (EC
1.17.4.1) (RIBONUCLEOTIDE REDUCTASE).
Length = 319
Score = 48 (21.6 bits)
Expect = 2.5
Sum P(3) = 0.92
Identities = 10/46 (21%)
Positives = 22/46 (47%)
Query: 51 IARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEA 96
+ +R P + + I+++EG+H ++ L S ET+ +
Subject: 177 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRS 222
Score = 37 (16.7 bits)
Expect = 2.5
Sum P(3) = 0.92
Identities = 12/32 (37%)
Positives = 14/32 (43%)
Query: 108 DAVASDSRGLRRALETALEVETIESQKTYPAF 139
DAV+ + L AL L E KTY F
Subject: 226 DAVSIEQEFLTVALPVKLIGMNCEMMKTYMEF 257
Score = 33 (14.9 bits)
Expect = 2.5
Sum P(3) = 0.92
Identities = 6/12 (50%)
Positives = 8/12 (66%)
Query: 34 IEVEMYECDCMY 45
IEV++ E C Y
Subject: 83 IEVQITEARCFY 94
Accession: P25386
INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1.
Length = 1790
Score = 55 (24.8 bits)
Expect = 3.2
Sum P(2) = 0.96
Identities = 15/51 (29%)
Positives = 22/51 (43%)
Query: 78 LTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRALETALEVE 128
+T+L LE KD STI Q D++ + +GL L + E
Subject: 809 MTQLRDVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAE 859
Score = 43 (19.4 bits)
Expect = 3.2
Sum P(2) = 0.96
Identities = 14/55 (25%)
Positives = 24/55 (43%)
Query: 122 ETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENL 176
E++ E +E K + E E+ ++ E I KS+ K K A E++
Subject:1492 ESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDI 1546
Accession: P22700
CALCIUM-TRANSPORTING ATPASE SARCOPLASMIC/ENDOPLASMIC
RETICULUM TYPE (EC 3.6.1.38) (CALCIUM PUMP).
Length = 1002
Score = 61 (27.5 bits)
Expect = 3.3
P = 0.96
Identities = 17/73 (23%)
Positives = 37/73 (50%)
Query: 48 FAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQI 107
FAE +G+ G FD ++ E A ++L+S +E + ++ +E + ++ I +
Subject: 642 FAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMT 701
Query: 108 DAVASDSRGLRRA 120
+D+ L++A
Subject: 702 GDGVNDAPALKKA 714
Accession: P48672
VIMENTIN A2 (FRAGMENT).
Length = 243
Score = 60 (27.0 bits)
Expect = 3.7
P = 0.98
Identities = 16/59 (27%)
Positives = 27/59 (45%)
Query: 92 ETLEAKRLVSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNME 150
E E +R V + ++DA+ + L R + E IES + A+L + NM+
Subject: 92 EANEYRRQVQALTCEVDALKGTNESLERQMREIEENFAIESSSSQDNIARLEEDIRNMK 150
Accession: P42976
DIHYDRODIPICOLINATE REDUCTASE (EC 1.3.1.26).
Length = 267
Score = 59 (26.6 bits)
Expect = 5.3
P = 1.0
Identities = 17/61 (27%)
Positives = 28/61 (45%)
Query: 43 CMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVST 102
C T ++ PEIG + IA E G+ + T +SE ++K+ E K + +
Subject: 65 CFTETQPDVLIDLTTPEIGKVHTKIALEHGVRPVVGTTGFSEADLKELTSLTEEKGIGAI 124
Query: 103 I 103
I
Subject: 125 I 125
Accession: P51634
MAGNESIUM-CHELATASE SUBUNIT CHLI.
Length = 357
Score = 59 (26.6 bits)
Expect = 5.7
P = 1.0
Identities = 14/34 (41%)
Positives = 18/34 (52%)
Query: 55 SGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVK 88
SG PE G + + GMHA++ T EL VK
Subject: 195 SGNPEEGELRPQLLDRFGMHAEIRTVREPELRVK 228
Accession: P48616
VIMENTIN.
Length = 465
Score = 59 (26.6 bits)
Expect = 5.9
P = 1.0
Identities = 15/59 (25%)
Positives = 28/59 (47%)
Query: 92 ETLEAKRLVSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNME 150
E+ E +R V T+ ++DA+ + L R + E ++E+ +L E NM+
Subject: 314 ESNEYRRQVQTLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDEIQNMK 372
Accession: P48191
HYPOTHETICAL 19.9 KD PROTEIN YCF3.
Length = 173
Score = 48 (21.6 bits)
Expect = 6.8
Sum P(2) = 1.0
Identities = 11/19 (57%)
Positives = 14/19 (73%)
Query: 136 YPAFAKLAAEQGNMEVATA 154
Y A + AAEQG+ME+A A
Subject: 116 YHAQGEQAAEQGDMEMAEA 134
Score = 38 (17.1 bits)
Expect = 6.8
Sum P(2) = 1.0
Identities = 7/22 (31%)
Positives = 13/22 (59%)
Query: 68 AKEEGMHAQLLTKLYSELEVKD 89
A+ EG +A+ L Y L +++
Subject: 45 AQSEGAYAEALENYYEALRLEE 66
Accession: Q06983
FLAGELLIN (PHASE-1-C FLAGELLIN).
Length = 504
Score = 43 (19.4 bits)
Expect = 7.5
Sum P(3) = 1.0
Identities = 11/36 (30%)
Positives = 19/36 (52%)
Query: 88 KDSAETLEAKRLVSTIESQIDAVASDSRGLRRALET 123
K +A T EAK + S I+ + D +G+ ++T
Subject: 251 KSTAGTDEAKAIASAIKGGKEGDTFDYKGVSFTIDT 286
Score = 40 (18.0 bits)
Expect = 7.5
Sum P(3) = 1.0
Identities = 10/37 (27%)
Positives = 16/37 (43%)
Query: 6 NQEDFMGLDRFFQDAVSHNNTDANAASSIEVEMYECD 42
NQ F G+ QD AN +I +++ + D
Subject: 127 NQTQFNGVKVLSQDNQMKIQVGANDGETITIDLQKID 163
Score = 35 (15.8 bits)
Expect = 7.5
Sum P(3) = 1.0
Identities = 14/51 (27%)
Positives = 21/51 (41%)
Query: 127 VETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLL 177
V + S ++ A A E NM A + S AN V + + +LL
Subject: 453 VTNLNSARSRIEDADYATEVSNMSKAQILQQAGTSVLAQANQVPQNVLSLL 503
Accession: P26505
5-AMINOLEVULINIC ACID SYNTHASE (EC 2.3.1.37)
(DELTA-AMINOLEVULINATE SYNTHASE) (DELTA-ALA SYNTHETASE).
Length = 405
Score = 58 (26.1 bits)
Expect = 8.0
P = 1.0
Identities = 11/32 (34%)
Positives = 19/32 (59%)
Query: 126 EVETIESQKTYPAFAKLAAEQGNMEVATAFEA 157
E++++ S+ Y FA + +QGN AT + A
Subject: 10 ELQSLHSEGRYRVFADIERQQGNFPRATRYNA 41
Accession: P15015
ATP SYNTHASE B' CHAIN (EC 3.6.1.34) (SUBUNIT II).
Length = 161
Score = 48 (21.6 bits)
Expect = 8.0
Sum P(2) = 1.0
Identities = 14/45 (31%)
Positives = 19/45 (42%)
Query: 25 NTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAK 69
N D A +++ E Y T AR EI A+ +A AK
Subject: 47 NDDLKQAEALKAETEAAIAAYETALAEARARAHDEIRAVTEAAAK 91
Score = 37 (16.7 bits)
Expect = 8.0
Sum P(2) = 1.0
Identities = 10/21 (47%)
Positives = 11/21 (52%)
Query: 140 AKLAAEQGNMEVATAFEAIVK 160
A AAE N EVA A +K
Subject: 89 AAKAAEARNAEVAKALNTRIK 109
Accession: P12379
M PROTEIN, SEROTYPE 24 PRECURSOR.
Length = 539
Score = 58 (26.1 bits)
Expect = 8.3
P = 1.0
Identities = 15/45 (33%)
Positives = 25/45 (55%)
Query: 100 VSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAA 144
+ T+E++ A+A+ L +ALE A+ T +S K A+ AA
Subject: 143 IKTLEAEKAALAARKADLEKALEGAMNFSTADSAKIKTLEAEKAA 187
Score = 58 (26.1 bits)
Expect = 8.3
P = 1.0
Identities = 15/45 (33%)
Positives = 25/45 (55%)
Query: 100 VSTIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAA 144
+ T+E++ A+A+ L +ALE A+ T +S K A+ AA
Subject: 213 IKTLEAEKAALAARKADLEKALEGAMNFSTADSAKIKTLEAEKAA 257
Accession: P11569
2-HYDROXYGLUTARYL-COA DEHYDRATASE ALPHA-SUBUNIT (EC
4.2.1.-).
Length = 476
Score = 45 (20.3 bits)
Expect = 9.3
Sum P(2) = 1.0
Identities = 9/20 (45%)
Positives = 12/20 (60%)
Query: 41 CDCMYPTFAEIARRSGQPEI 60
C+CM + +IARR P I
Subject: 190 CNCMTKWYEDIARRHNIPLI 209
Score = 45 (20.3 bits)
Expect = 9.3
Sum P(2) = 1.0
Identities = 9/26 (34%)
Positives = 14/26 (53%)
Query: 140 AKLAAEQGNMEVATAFEAIVKSETKH 165
A + +G +E A AFE + K +H
Subject: 291 ADVVTARGRVEAAEAFELLAKELEQH 316
Accession: P32063
OMEGA-12 ACYL-[ACYL-CARRIER PROTEIN] DESATURASE PRECURSOR
(EC 1.14.99.6).
Length = 385
Score = 54 (24.3 bits)
Expect = 9.7
Sum P(2) = 1.0
Identities = 13/40 (32%)
Positives = 19/40 (47%)
Query: 140 AKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLEV 179
AKLA G+ +A I E +HA + +E L E+
Subject: 228 AKLAQHYGDKNLAQVCGNIASDEKRHATAYTKIVEKLAEI 267
Score = 35 (15.8 bits)
Expect = 9.7
Sum P(2) = 1.0
Identities = 4/14 (28%)
Positives = 12/14 (85%)
Query: 54 RSGQPEIGAMFDAI 67
++G+PE+ +F+++
Subject: 51 KAGRPEVDELFNSL 64
Accession: Q10179
PUTATIVE GLYCYL-TRNA SYNTHETASE (EC 6.1.1.14)
(GLYCINE--TRNA LIGASE) (GLYRS).
Length = 652
Score = 49 (22.1 bits)
Expect = 9.7
Sum P(2) = 1.0
Identities = 12/66 (18%)
Positives = 27/66 (40%)
Query: 113 DSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRA 172
D++ + A+ + E E +E A K+ +E + + + KH ++
Subject: 434 DAKAVEEAMISWPESEKVEKSAQLVAEGKIIVNVNGVEHTVESDLVTIEKRKHTEHIRTY 493
Query: 173 LENLLE 178
N++E
Subject: 494 TPNVIE 499
Score = 42 (18.9 bits)
Expect = 9.7
Sum P(2) = 1.0
Identities = 10/23 (43%)
Positives = 12/23 (52%)
Query: 34 IEVEMYECDCMYPTFAEIARRSG 56
IE M E DC T E+ + SG
Subject: 62 IEESMLEVDCSMLTPHEVLKTSG 84
Accession: P33890
COLD SHOCK INDUCED PROTEIN TIR2 PRECURSOR (SERINE-RICH
PROTEIN 2).
Length = 251
Score = 57 (25.7 bits)
Expect = 10.
P = 1.0
Identities = 26/107 (24%)
Positives = 42/107 (39%)
Query: 64 FDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVSTIESQIDAVASDSRGLRRALET 123
F A++K M ++L ELE T A ++ + AVAS S A+ +
Subject: 85 FAAVSKMLTMVPWYSSRLLPELESLLGTSTTAASSTEASSAATSSAVASSSETTSSAVAS 144
Query: 124 ALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVK 170
+ E + + A + A + A + V S TK A+ K
Subject: 145 SSEATSSAVASSSEASSSAATSSAVASSSEATSSTVASSTKAASSTK 191
Parameters:
B=50
H=1
V=500
-ctxfactor=1.00
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.126 0.335 same same same
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 180 180 10. 58 3 10 23 0.23 32
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 62 (27.9 bits) 899 (405.0 bits) 40 40
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 5930 11150999 2505873 8623785 21341 88
Database: sp.prot
Release date: unknown
Posted date: 11:35 PM CDT Aug 21, 1997
# of letters in database: 21,210,388
# of sequences in database: 59,021
# of database sequences satisfying E: 24
No. of states in DFA: 566 (56 KB)
Total size of DFA: 120 KB (128 KB)
Time to generate neighborhood: 0.02u 0.01s 0.03t Real: 00:00:00
Time to search database: 18.56u 0.25s 18.81t Real: 00:00:20
Total cpu time: 18.59u 0.35s 18.94t Real: 00:00:20