Accession: P23993
PHOTOSYSTEM I REACTION CENTRE SUBUNIT XI PRECURSOR
(SUBUNIT V) (PSI-L).
Length = 209
Score = 756 (349.4 bits)
Expect = 5.9e-105
Sum P(2) = 5.9e-105
Identities = 139/178 (78%)
Positives = 157/178 (88%)
Query: 40 TRTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPL 99
TR F ++A+++DKPT+QV+QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPL
Subject: 32 TRRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPL 91
Query: 100 LRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEG 159
LRGIEVGLAHG+ LVGPF GPLRNT G AG+L A GL+ ILSVCLTMYGVASFNEG
Subject: 92 LRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEG 151
Query: 160 EPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
EPSTAP LTLTGRKK D LQTA+GW++F+GGFFFGG+SG +WAYFLLYVLDLPY+ K
Subject: 152 EPSTAPVLTLTGRKKEADKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209
Score = 34 (15.7 bits)
Expect = 5.9e-105
Sum P(2) = 5.9e-105
Identities = 7/17 (41%)
Positives = 10/17 (58%)
Query: 23 ALISPKGLSASPLRRIP 39
A P+G+S + L R P
Subject: 19 ACSKPRGMSGASLTRRP 35
Accession: P51222
PHOTOSYSTEM I REACTION CENTRE SUBUNIT XI (SUBUNIT V)
(PSI-L).
Length = 153
Score = 302 (139.6 bits)
Expect = 2.1e-51
Sum P(2) = 2.1e-51
Identities = 57/103 (55%)
Positives = 75/103 (72%)
Query: 58 QVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPF 117
+ I+P N DPF+G+L TPV++S L NLPAYR +SPLLRG+E+G+AHG+FL+GPF
Subject: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62
Query: 118 VKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGE 160
K GPLR T A AG L++ GLI+IL+ CL+MYG SF +
Subject: 63 DKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFTRSD 105
Score = 102 (47.1 bits)
Expect = 2.1e-51
Sum P(2) = 2.1e-51
Identities = 18/36 (50%)
Positives = 24/36 (66%)
Query: 172 RKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLL 207
R + DPLQTA+GW +F+ GF G + G +AY LL
Subject: 103 RSDSKDPLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138
Accession: P25902
PHOTOSYSTEM I REACTION CENTRE SUBUNIT XI.
Length = 148
Score = 302 (139.6 bits)
Expect = 2.8e-50
Sum P(2) = 2.8e-50
Identities = 53/114 (46%)
Positives = 80/114 (70%)
Query: 58 QVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPF 117
++++P NGDPF+G L TP++ S L+ ++ NLPAYR +SP+L G+EVG+AHG+FL+GP+
Subject: 3 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 62
Query: 118 VKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTG 171
VK GPLR++ A G ++ LI++ + CL YG+ SF +G S+ P T G
Subject: 63 VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSSDPLKTSEG 116
Score = 94 (43.4 bits)
Expect = 2.8e-50
Sum P(2) = 2.8e-50
Identities = 15/31 (48%)
Positives = 23/31 (74%)
Query: 177 DPLQTADGWAKFSGGFFFGGISGVIWAYFLL 207
DPL+T++GW++F+ GFF G + A+FLL
Subject: 109 DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 139
Accession: P37277
PHOTOSYSTEM I REACTION CENTRE SUBUNIT XI.
Length = 157
Score = 268 (123.9 bits)
Expect = 1.8e-49
Sum P(2) = 1.8e-49
Identities = 47/99 (47%)
Positives = 69/99 (69%)
Query: 58 QVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPF 117
QV+Q NGDPF+G L TP++ S ++ NLPAYR +SP+LRG+EVG+AHG+FL+GP+
Subject: 6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPW 65
Query: 118 VKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASF 156
GPLR++ Y G + A LI++ + L+ YG+ +F
Subject: 66 TLLGPLRDSEYQYIGGLIGALALILVATAALSSYGLVTF 104
Score = 122 (56.4 bits)
Expect = 1.8e-49
Sum P(2) = 1.8e-49
Identities = 22/41 (53%)
Positives = 29/41 (70%)
Query: 167 LTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLL 207
+T G + + D LQTADGW++F+ GFF GG+ G AYFLL
Subject: 102 VTFQGEQGSGDTLQTADGWSQFAAGFFVGGMGGAFVAYFLL 142
Accession: P49486
PHOTOSYSTEM I REACTION CENTRE SUBUNIT XI (SUBUNIT V)
(PSI-L).
Length = 150
Score = 310 (143.3 bits)
Expect = 1.5e-46
Sum P(2) = 1.5e-46
Identities = 59/101 (58%)
Positives = 79/101 (78%)
Query: 60 IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 119
I+P N DPF+G L TP+TSS + L NLPAYR ++PLLRG+E+GLAHG+FL+GPFVK
Subject: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVK 64
Query: 120 AGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGE 160
GPLRN+ A +G L+ GLI+IL++ LT+YGVA+F +G+
Subject: 65 LGPLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQ 105
Score = 59 (27.3 bits)
Expect = 1.5e-46
Sum P(2) = 1.5e-46
Identities = 12/29 (41%)
Positives = 14/29 (48%)
Query: 179 LQTADGWAKFSGGFFFGGISGVIWAYFLL 207
LQT W +F GGFF G +A L
Subject: 113 LQTKKAWDQFKGGFFVGACGSAGFALICL 141
Accession: P31092
PHOTOSYSTEM I REACTION CENTRE SUBUNIT XI (SUBUNIT V)
(PSI-L) (FRAGMENTS).
Length = 65
Score = 86 (39.8 bits)
Expect = 8.1e-10
Sum P(2) = 8.1e-10
Identities = 18/53 (33%)
Positives = 29/53 (54%)
Query: 50 IQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRG 102
+ +D +V+ P DP G+LETPV +SPL+ + + L AY + + G
Subject: 2 LPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKKFFNXLTAYXXGLVGMAHG 54
Score = 48 (22.2 bits)
Expect = 8.1e-10
Sum P(2) = 8.1e-10
Identities = 8/12 (66%)
Positives = 10/12 (83%)
Query: 105 VGLAHGFFLVGP 116
VG+AHG+ L GP
Subject: 49 VGMAHGYXLXGP 60
Accession: P25937
PHOTOSYSTEM I REACTION CENTRE SUBUNIT XI (FRAGMENT).
Length = 20
Score = 68 (31.4 bits)
Expect = 0.016
P = 0.016
Identities = 10/18 (55%)
Positives = 15/18 (83%)
Query: 58 QVIQPINGDPFIGSLETP 75
++++P NGDPF+G L TP
Subject: 3 ELVKPYNGDPFVGHLSTP 20
Accession: P42052
PHOTOSYSTEM 1 REACTION CENTRE SUBUNIT 8 (PHOTOSYTEM I
17.5 KD PROTEIN) (FRAGMENT).
Length = 15
Score = 56 (25.9 bits)
Expect = 1.1
P = 0.66
Identities = 12/15 (80%)
Positives = 12/15 (80%)
Query: 50 IQADKPTFQVIQPIN 64
IQAD PTFQVIQ N
Subject: 1 IQADXPTFQVIQDDN 15
Accession: Q00583
3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 3 (EC
1.1.1.34) (HMG-COA REDUCTASE 3).
Length = 586
Score = 51 (23.6 bits)
Expect = 2.3
Sum P(2) = 0.90
Identities = 10/45 (22%)
Positives = 21/45 (46%)
Query: 16 FASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60
+AS +++ G++ +P+ R PT + ++ D F I
Subject: 280 YASGGATSVLLRDGMTRAPVVRFPTAKRAADLKFFMEDPDNFDTI 324
Score = 45 (20.8 bits)
Expect = 2.3
Sum P(2) = 0.90
Identities = 10/38 (26%)
Positives = 17/38 (44%)
Query: 133 GSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLT 170
G++ G + S CL + GV ++ P + L T
Subject: 508 GTVGGGTQLASQSACLNLLGVKGASKDSPGSNSRLLAT 545
Accession: P08193
ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE
SUBUNIT BETA (EC 6.4.1.2).
Length = 304
Score = 61 (28.2 bits)
Expect = 2.7
P = 0.93
Identities = 14/41 (34%)
Positives = 21/41 (51%)
Query: 1 MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTR 41
++ T PT +S+SFA + PK L A P+R + R
Subject: 195 ISVLTDPTMGGVSASFAMLGDLNIAEPKALMALPVRVLSNR 235
Accession: P40472
HYPOTHETICAL 48.1 KD PROTEIN IN KGD1-RPI1 INTERGENIC
REGION.
Length = 475
Score = 61 (28.2 bits)
Expect = 3.4
Sum P(2) = 0.97
Identities = 17/51 (33%)
Positives = 27/51 (52%)
Query: 2 ATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQA 52
A+AT+ T+ SSS +SS+ + + +S+S PT T T A Q+
Subject: 108 ASATASTSQGASSSSSSSSATSTLESSSVSSSSEEAAPTSTVVSTSSATQS 158
Score = 33 (15.3 bits)
Expect = 3.4
Sum P(2) = 0.97
Identities = 9/39 (23%)
Positives = 14/39 (35%)
Query: 161 PSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISG 199
P+ + +L + D G + G F GG G
Subject: 421 PNNSDALNYNVKIVAADDSSNVIGECVYENGEFSGGADG 459
Accession: P39314
HYPOTHETICAL 35.5 KD PROTEIN IN RPLI-CPDB INTERGENIC
REGION (F324).
Length = 324
Score = 52 (24.0 bits)
Expect = 4.0
Sum P(2) = 0.98
Identities = 8/23 (34%)
Positives = 14/23 (60%)
Query: 185 WAKFSGGFFFGGISGVIWAYFLL 207
WA+++ G +S V WA++ L
Subject: 156 WARYTSGIVLALVSVVCWAWYAL 178
Score = 40 (18.5 bits)
Expect = 4.0
Sum P(2) = 0.98
Identities = 8/23 (34%)
Positives = 12/23 (52%)
Query: 96 VSPLLRGIEVGLAHGFFLVGPFV 118
+S +L + GL G VGP +
Subject: 5 ISGVLYALLAGLMWGLIFVGPLI 27
Accession: P44530
HYPOTHETICAL PROTEIN HI0125.
Length = 438
Score = 43 (19.9 bits)
Expect = 4.6
Sum P(3) = 0.99
Identities = 8/23 (34%)
Positives = 16/23 (69%)
Query: 69 IGSLETPVTSSPLIAWYLSNLPA 91
+G + T ++++ + AW L NLP+
Subject: 109 MGVVFTLISTTGIRAWILRNLPS 131
Score = 40 (18.5 bits)
Expect = 4.6
Sum P(3) = 0.99
Identities = 14/40 (35%)
Positives = 18/40 (45%)
Query: 127 AYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPS 166
A AG A L G I+ LT ++S G TAP+
Subject: 267 AVAGQADLLDKDGQIINGGKALTSDSISSLFSGLFGTAPA 306
Score = 38 (17.6 bits)
Expect = 4.6
Sum P(3) = 0.99
Identities = 7/20 (35%)
Positives = 13/20 (65%)
Query: 193 FFGGISGVIWAYFLLYVLDL 212
F G +SG+I A F++ ++
Subject: 374 FVGAMSGLICAVFIVLTANI 393
Accession: P17195
MAJOR SURFACE ANTIGEN PRECURSOR.
Length = 366
Score = 48 (22.2 bits)
Expect = 4.6
Sum P(2) = 0.99
Identities = 10/23 (43%)
Positives = 12/23 (52%)
Query: 116 PFVKAGPLRNTAYAGGAGSLAAG 138
P +K PLR AG G + AG
Subject: 188 PVIKTPPLRKKKMAGTFGGILAG 210
Score = 44 (20.3 bits)
Expect = 4.6
Sum P(2) = 0.99
Identities = 8/22 (36%)
Positives = 12/22 (54%)
Query: 191 GFFFGGISGVIWAYFLLYVLDL 212
GF G G +W Y L+++ L
Subject: 262 GFCPWGCPGFLWTYLRLFIIFL 283
Accession: P34735
HYPOTHETICAL PROTEIN IN LEU2 3'REGION (FRAGMENT).
Length = 373
Score = 59 (27.3 bits)
Expect = 5.4
P = 1.0
Identities = 15/32 (46%)
Positives = 21/32 (65%)
Query: 1 MATATSPTASQLSSSFASSNTRALISPKGLSA 32
+ATATS +A+ SSS +S+N R+ KG A
Subject: 227 VATATSASAAASSSSASSANNRSTGLSKGAKA 258
Accession: P53514
OUTER MEMBRANE USHER PROTEIN PMFC PRECURSOR.
Length = 828
Score = 59 (27.3 bits)
Expect = 5.8
P = 1.0
Identities = 16/45 (35%)
Positives = 22/45 (48%)
Query: 3 TATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTI 47
TAT A+ SSS SS R ++ G++ P T T+ F I
Subject: 652 TATRYGAALHSSSMTSSTARIMVDTDGVAGVPFNGQSTTTNRFGI 696
Accession: P51198
ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE
SUBUNIT BETA (EC 6.4.1.2).
Length = 288
Score = 58 (26.8 bits)
Expect = 7.1
P = 1.0
Identities = 14/42 (33%)
Positives = 22/42 (52%)
Query: 1 MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRT 42
++ TSPT +++SFA + PK L A RR+ +T
Subject: 202 LSVLTSPTTGGVTASFAMLGDLIIAEPKALIAFAGRRVIEQT 243
Accession: Q04635
ESC1 PROTEIN.
Length = 413
Score = 58 (26.8 bits)
Expect = 7.5
P = 1.0
Identities = 14/38 (36%)
Positives = 24/38 (63%)
Query: 4 ATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTR 41
++S + S +SS +SNT ++ SP SA+PL P++
Subject: 166 SSSDSVSTSASSSNASNTVSVTSPASSSATPLPNQPSQ 203
Accession: P12624
MYRISTOYLATED ALANINE-RICH C-KINASE SUBSTRATE (MARCKS)
(ACAMP-81).
Length = 331
Score = 46 (21.3 bits)
Expect = 7.6
Sum P(2) = 1.0
Identities = 13/36 (36%)
Positives = 15/36 (41%)
Query: 130 GGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAP 165
G AG+ A GG G A GEP+ AP
Subject: 184 GAAGASAEGGKDEASGGAAAAAGEAGAAPGEPTAAP 219
Score = 44 (20.3 bits)
Expect = 7.6
Sum P(2) = 1.0
Identities = 10/36 (27%)
Positives = 21/36 (58%)
Query: 6 SPTASQLSSSFASSNTRALISPKGLSASPLRRIPTR 41
SPTA++ ++ A+S++ + + G + SP P +
Subject: 116 SPTAAEGEAASAASSSSSPKAEDGATPSPSNETPKK 151
Accession: Q10616
HYPOTHETICAL 56.0 KD PROTEIN CY373.09C.
Length = 521
Score = 58 (26.8 bits)
Expect = 7.7
P = 1.0
Identities = 17/52 (32%)
Positives = 25/52 (48%)
Query: 102 GIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGV 153
G+ +GL G L VK+G L + G A G LIV+ + +T G+
Subject: 77 GVAIGLGSGAVLSMIPVKSGTLIDKLMFQGTPGDARGVLIVVSATMITTIGI 128
Parameters:
B=100
H=1
V=500
-ctxfactor=1.00
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.408 same same same
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 217 217 10. 58 3 11 22 0.18 33
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 62 (28.7 bits) 756 (349.4 bits) 33 33
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 4379 9567587 1997599 7552706 17282 228
Database: sp.prot
Release date: unknown
Posted date: 11:35 PM CDT Aug 21, 1997
# of letters in database: 21,210,388
# of sequences in database: 59,021
# of database sequences satisfying E: 20
No. of states in DFA: 550 (54 KB)
Total size of DFA: 101 KB (128 KB)
Time to generate neighborhood: 0.02u 0.01s 0.03t Real: 00:00:00
Time to search database: 16.02u 0.33s 16.35t Real: 00:00:20
Total cpu time: 16.05u 0.46s 16.51t Real: 00:00:20