Biology WorkBench

Version 2.0

BLASTP Results

Compares an amino acid query sequence against a protein sequence.

Algorithm Citation:
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10.
Program Citation:
National Center for Biotechnology Information,Bldg 38A, NIH,8600 Rockville Pike,Bethesda, MD 20894

PSI-J (Tobacco)

Query=  PSAJ_TOBAC
        (44 letters)
Database:  sp.prot
           59,021 sequences; 21,210,388 total letters.
Check Sequences and then Press 'Import to Workbench' to Import them to the Workbench

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N


Accession: P12193
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 44
Score = 227 (108.3 bits)
Expect = 3.5e-28
P = 3.5e-28

Identities = 44/44 (100%)
Positives = 44/44 (100%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFFSF 44
             MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFFSF
Subject:   1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFFSF 44

Accession: P12192
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 44
Score = 207 (98.8 bits)
Expect = 2.6e-25
P = 2.6e-25

Identities = 39/44 (88%)
Positives = 42/44 (95%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFFSF 44
             MRD+KTYLSVAPV+STLWFGAL GLLIEINR FPDAL+FPFFSF
Subject:   1 MRDIKTYLSVAPVVSTLWFGALRGLLIEINRLFPDALSFPFFSF 44

Accession: P19443
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 42
Score = 205 (97.8 bits)
Expect = 5.3e-25
P = 5.3e-25

Identities = 39/42 (92%)
Positives = 41/42 (97%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFF 42
             MRD+KTYLSVAPVLSTLWFGALAGLLIEINR FPDAL+FPFF
Subject:   1 MRDIKTYLSVAPVLSTLWFGALAGLLIEINRLFPDALSFPFF 42

Accession: P12191
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 42
Score = 186 (88.7 bits)
Expect = 2.8e-22
P = 2.8e-22

Identities = 35/42 (83%)
Positives = 38/42 (90%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFF 42
             M+D+KTYLS APVL+TLWFG LAGLLIEINRFFPDAL  PFF
Subject:   1 MQDVKTYLSTAPVLATLWFGFLAGLLIEINRFFPDALVLPFF 42

Accession: P41613
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 44
Score = 132 (63.0 bits)
Expect = 1.6e-14
P = 1.6e-14

Identities = 28/37 (75%)
Positives = 30/37 (81%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDAL 37
             M+DLKTYLS APVL+ L    LA LLIEINRFFPDAL
Subject:   1 MQDLKTYLSTAPVLAILCVSFLAALLIEINRFFPDAL 37

Accession: P49485
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 41
Score = 127 (60.6 bits)
Expect = 8.7e-14
P = 8.7e-14

Identities = 26/41 (63%)
Positives = 28/41 (68%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPF 41
             M DL+ YLS APVL TLW    AG +IEINRFFPD L   F
Subject:   1 MNDLQKYLSTAPVLLTLWMTFTAGFIIEINRFFPDMLGLYF 41

Accession: P23075
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX.
            
Length = 38
Score = 126 (60.1 bits)
Expect = 1.3e-13
P = 1.3e-13

Identities = 27/31 (87%)
Positives = 27/31 (87%)
Query:    14 LSTLWFGALAGLLIEINRFFPDALTFPFFSF 44
             LST    ALAGLLIEINRFFPDALTFPFFSF
Subject:   8 LSTAPVLALAGLLIEINRFFPDALTFPFFSF 38

Score = 44 (21.0 bits)
Expect = 5.5
P = 1.0

Identities = 9/15 (60%)
Positives = 11/15 (73%)
Query:     1 MRDLKTYLSVAPVLS 15
             M+   TYLS APVL+
Subject:   1 MKHFLTYLSTAPVLA 15

Accession: P30394
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 37
Score = 121 (57.7 bits)
Expect = 7.0e-13
P = 7.0e-13

Identities = 24/37 (64%)
Positives = 27/37 (72%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDAL 37
             M+   TYLS APV++ LWF   A LLIEINRFFPD L
Subject:   1 MKYFTTYLSTAPVVAVLWFTLTASLLIEINRFFPDIL 37

Accession: P25901
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX.
            
Length = 41
Score = 118 (56.3 bits)
Expect = 1.7e-12
P = 1.7e-12

Identities = 22/40 (55%)
Positives = 27/40 (67%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFP 40
             M+   TYLS APVL+ +W    AG+LIE NRF+PD L  P
Subject:   1 MKHFLTYLSTAPVLAAIWMTITAGILIEFNRFYPDLLFHP 40

Accession: P48117
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 40
Score = 113 (53.9 bits)
Expect = 9.1e-12
P = 9.1e-12

Identities = 24/35 (68%)
Positives = 26/35 (74%)
Query:     7 YLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPF 41
             YLS APV+ TL    LAGLLIEINRF PD L +PF
Subject:   6 YLSTAPVIGTLTAFFLAGLLIEINRFNPDLLVYPF 40

Accession: P51194
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J).
            
Length = 42
Score = 109 (52.0 bits)
Expect = 3.3e-11
P = 3.3e-11

Identities = 20/33 (60%)
Positives = 23/33 (69%)
Query:     7 YLSVAPVLSTLWFGALAGLLIEINRFFPDALTF 39
             YLS APV+  LW    AG +IE+NRFFPD L F
Subject:   8 YLSTAPVIGVLWMTFTAGFIIELNRFFPDVLYF 40

Accession: P23080
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (FRAGMENT).
            
Length = 43
Score = 74 (35.3 bits)
Expect = 3.4e-06
P = 3.4e-06

Identities = 15/31 (48%)
Positives = 20/31 (64%)
Query:     7 YLSVAPVLSTLWFGALAGLLIEINRFFPDAL 37
             ++S APV +T+     AG+LIE N FFP  L
Subject:  13 FISTAPVAATIXLIITAGILIEFNXFFPXLL 43

Accession: P17230
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J)
            (FRAGMENT).
            
Length = 16
Score = 69 (32.9 bits)
Expect = 4.8e-05
P = 4.8e-05

Identities = 14/16 (87%)
Positives = 14/16 (87%)
Query:     1 MRDLKTYLSVAPVLST 16
             MRD KTYLSVAPVL T
Subject:   1 MRDFKTYLSVAPVLXT 16

Accession: P17229
PHOTOSYSTEM I REACTION CENTRE SUBUNIT IX (PSI-J)
            (FRAGMENT).
            
Length = 13
Score = 60 (28.6 bits)
Expect = 0.0012
P = 0.0012

Identities = 12/13 (92%)
Positives = 12/13 (92%)
Query:     1 MRDLKTYLSVAPV 13
             MRDLKTYL VAPV
Subject:   1 MRDLKTYLXVAPV 13

Accession: P31225
CORTICOSTEROID-BINDING PROTEIN.
            
Length = 489
Score = 44 (21.0 bits)
Expect = 0.0019
Sum P(3) = 0.0019

Identities = 8/22 (36%)
Positives = 15/22 (68%)
Query:    14 LSTLWFGALAGLLIEINRFFPD 35
             ++++ FGAL  ++ E +R F D
Subject: 288 INSIHFGALGKVIFEFDRIFWD 309

Score = 30 (14.3 bits)
Expect = 0.0019
Sum P(3) = 0.0019

Identities = 6/12 (50%)
Positives = 8/12 (66%)
Query:     2 RDLKTYLSVAPV 13
             +DLKT+ S   V
Subject:  99 KDLKTFSSTGEV 110

Score = 27 (12.9 bits)
Expect = 0.0019
Sum P(3) = 0.0019

Identities = 4/10 (40%)
Positives = 6/10 (60%)
Query:    34 PDALTFPFFS 43
             P   T+P F+
Subject: 334 PKPFTYPLFA 343

Accession: P10905
SN-GLYCEROL-3-PHOSPHATE TRANSPORT SYSTEM PERMEASE PROTEIN
            UGPA.
            
Length = 295
Score = 57 (27.2 bits)
Expect = 0.085
P = 0.082

Identities = 10/36 (27%)
Positives = 23/36 (63%)
Query:     6 TYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPF 41
             T+++V+ +L +L+F AL   ++  +RF+   +  P+
Subject:  80 TFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPY 115

Accession: P33350
HYPOTHETICAL 15.0 KD PROTEIN IN MOLR-BGLX INTERGENIC
            REGION.
            
Length = 135
Score = 37 (17.7 bits)
Expect = 0.085
Sum P(2) = 0.082

Identities = 8/15 (53%)
Positives = 10/15 (66%)
Query:    14 LSTLWFGALAGLLIE 28
             L T W  A+AG LI+
Subject:  21 LRTDWLDAIAGSLIK 35

Score = 31 (14.8 bits)
Expect = 0.085
Sum P(2) = 0.082

Identities = 5/9 (55%)
Positives = 7/9 (77%)
Query:    27 IEINRFFPD 35
             + +NRF PD
Subject: 101 LTLNRFTPD 109

Accession: P30606
MYO-INOSITOL TRANSPORTER 2.
            
Length = 612
Score = 31 (14.8 bits)
Expect = 0.15
Sum P(3) = 0.14

Identities = 6/11 (54%)
Positives = 6/11 (54%)
Query:    34 PDALTFPFFSF 44
             P  L F FF F
Subject: 281 PTVLQFSFFCF 291

Score = 29 (13.8 bits)
Expect = 0.15
Sum P(3) = 0.14

Identities = 6/12 (50%)
Positives = 8/12 (66%)
Query:    20 GALAGLLIEINR 31
             G ++  LI INR
Subject: 131 GYISSALISINR 142

Score = 28 (13.4 bits)
Expect = 0.15
Sum P(3) = 0.14

Identities = 6/13 (46%)
Positives = 9/13 (69%)
Query:     9 SVAPVLSTLWFGA 21
             S++P + TL F A
Subject: 107 SISPFIITLTFVA 119

Accession: P45033
HEME EXPORTER PROTEIN B (CYTOCHROME C-TYPE BIOGENESIS
            PROTEIN CCMB).
            
Length = 221
Score = 37 (17.7 bits)
Expect = 0.18
Sum P(2) = 0.17

Identities = 7/18 (38%)
Positives = 8/18 (44%)
Query:    18 WFGALAGLLIEINRFFPD 35
             W  AL   L+   R F D
Subject:  55 WVAALLSALLSFERLFRD 72

Score = 31 (14.8 bits)
Expect = 0.18
Sum P(2) = 0.17

Identities = 5/9 (55%)
Positives = 7/9 (77%)
Query:    11 APVLSTLWF 19
             A +L+ LWF
Subject:  19 AEILNPLWF 27

Accession: P33930
HEME EXPORTER PROTEIN B (CYTOCHROME C-TYPE BIOGENESIS
            PROTEIN CCMB).
            
Length = 220
Score = 41 (19.6 bits)
Expect = 0.25
Sum P(2) = 0.22

Identities = 8/21 (38%)
Positives = 11/21 (52%)
Query:    17 LWFGALAGLLIEINRFFPDAL 37
             +W  AL   L+ + R F D L
Subject:  54 IWVAALLSSLLALERLFRDDL 74

Score = 26 (12.4 bits)
Expect = 0.25
Sum P(2) = 0.22

Identities = 4/9 (44%)
Positives = 6/9 (66%)
Query:    11 APVLSTLWF 19
             A + + LWF
Subject:  19 AEIANPLWF 27

Accession: P51958
CELL DIVISION CONTROL PROTEIN 2 HOMOLOG (EC 2.7.1.-) (P34
            PROTEIN KINASE).
            
Length = 302
Score = 29 (13.8 bits)
Expect = 0.28
Sum P(3) = 0.25

Identities = 6/10 (60%)
Positives = 6/10 (60%)
Query:     3 DLKTYLSVAP 12
             DLK YL   P
Subject:  86 DLKKYLDSIP 95

Score = 26 (12.4 bits)
Expect = 0.28
Sum P(3) = 0.25

Identities = 4/7 (57%)
Positives = 6/7 (85%)
Query:    36 ALTFPFF 42
             A+T P+F
Subject: 281 AMTHPYF 287

Score = 26 (12.4 bits)
Expect = 0.28
Sum P(3) = 0.25

Identities = 6/11 (54%)
Positives = 7/11 (63%)
Query:    16 TLWFGALAGLL 26
             TLW+ A   LL
Subject: 166 TLWYRAPEVLL 176

Accession: P33346
HYPOTHETICAL 138.1 KD PROTEIN IN MOLR-BGLX INTERGENIC
            REGION.
            
Length = 1210
Score = 31 (14.8 bits)
Expect = 0.39
Sum P(3) = 0.32

Identities = 8/14 (57%)
Positives = 9/14 (64%)
Query:    14 LSTLWFGALAGLLI 27
             LS L   AL GLL+
Subject: 612 LSILGLDALPGLLL 625

Score = 31 (14.8 bits)
Expect = 0.39
Sum P(3) = 0.32

Identities = 6/9 (66%)
Positives = 7/9 (77%)
Query:     4 LKTYLSVAP 12
             LK+YLS  P
Subject: 405 LKSYLSAPP 413

Score = 27 (12.9 bits)
Expect = 0.39
Sum P(3) = 0.32

Identities = 5/8 (62%)
Positives = 6/8 (75%)
Query:    34 PDALTFPF 41
             P AL+F F
Subject: 923 PQALSFDF 930

Accession: P51117
CHALCONE--FLAVANONE ISOMERASE (EC 5.5.1.6).
            
Length = 234
Score = 54 (25.8 bits)
Expect = 0.42
P = 0.34

Identities = 13/36 (36%)
Positives = 16/36 (44%)
Query:     9 SVAPVLSTLWFGALAGLLIEINRFFPDALTFPFFSF 44
             S  P L+  W G     L +   FF D +T PF  F
Subject:  59 SAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKF 94

Accession: P28078
CLASS II HISTOCOMPATIBILITY ANTIGEN, M ALPHA CHAIN
            PRECURSOR.
            
Length = 261
Score = 35 (16.7 bits)
Expect = 0.43
Sum P(2) = 0.35

Identities = 10/25 (40%)
Positives = 12/25 (48%)
Query:    14 LSTLWFGALAGLLIEINRFFPDALT 38
             L  L FG    L+  I+  FP  LT
Subject: 134 LKPLEFGKPNTLVCFISNLFPPTLT 158

Score = 31 (14.8 bits)
Expect = 0.43
Sum P(2) = 0.35

Identities = 6/10 (60%)
Positives = 7/10 (70%)
Query:    35 DALTFPFFSF 44
             D LTF  FS+
Subject: 180 DGLTFQAFSY 189

Accession: P32718
HYPOTHETICAL 33.8 KD PROTEIN IN FDHF-PHNP INTERGENIC
            REGION (F309).
            
Length = 309
Score = 54 (25.8 bits)
Expect = 0.44
P = 0.36

Identities = 13/37 (35%)
Positives = 19/37 (51%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLIEINRFFPDAL 37
             +RDL  +   AP + +L   A   +   IN F PDA+
Subject: 206 LRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAV 242

Accession: P48449
LANOSTEROL SYNTHASE (EC 5.4.99.7)
            (OXIDOSQUALENE--LANOSTEROL CYCLASE) (2,3-EPOXYSQUALENE--LANOSTEROL
            CYCLASE) (OSC).
            
Length = 732
Score = 38 (18.1 bits)
Expect = 0.52
Sum P(2) = 0.40

Identities = 9/23 (39%)
Positives = 11/23 (47%)
Query:     3 DLKTYLSVAPVLSTLWFGALAGL 25
             D K Y    P   T + GAL G+
Subject:  59 DTKNYFKDLPKAHTAFEGALNGM 81

Score = 31 (14.8 bits)
Expect = 0.52
Sum P(2) = 0.40

Identities = 5/12 (41%)
Positives = 7/12 (58%)
Query:    29 INRFFPDALTFP 40
             +N  FP+   FP
Subject: 208 LNTLFPEMWLFP 219

Accession: P48995
TRP-1 PROTEIN.
            
Length = 793
Score = 42 (20.0 bits)
Expect = 0.56
Sum P(2) = 0.43

Identities = 6/11 (54%)
Positives = 10/11 (90%)
Query:    14 LSTLWFGALAG 24
             L+T+WFG ++G
Subject: 331 LNTVWFGQMSG 341

Score = 27 (12.9 bits)
Expect = 0.56
Sum P(2) = 0.43

Identities = 5/12 (41%)
Positives = 8/12 (66%)
Query:     3 DLKTYLSVAPVL 14
             +  T + VAPV+
Subject: 153 EYSTTMDVAPVI 164

Accession: P27668
SENSOR PROTEIN UHPB (EC 2.7.3.-).
            
Length = 500
Score = 39 (18.6 bits)
Expect = 0.65
Sum P(2) = 0.48

Identities = 8/20 (40%)
Positives = 11/20 (55%)
Query:    24 GLLIEINRFFPDALTFPFFS 43
             GL  E++RF P  L  P  +
Subject: 202 GLPAELSRFTPFCLALPIIA 221

Score = 28 (13.4 bits)
Expect = 0.65
Sum P(2) = 0.48

Identities = 4/11 (36%)
Positives = 7/11 (63%)
Query:     8 LSVAPVLSTLW 18
             L++AP+    W
Subject: 149 LTLAPICLVFW 159

Accession: P47693
TYROSYL-TRNA SYNTHETASE (EC 6.1.1.1) (TYROSINE--TRNA
            LIGASE) (TYRRS).
            
Length = 407
Score = 35 (16.7 bits)
Expect = 0.71
Sum P(2) = 0.51

Identities = 9/21 (42%)
Positives = 13/21 (61%)
Query:     1 MRDLKTYLSVAPVLSTLWFGA 21
             +R+L  + SV  +LST  F A
Subject: 143 IRELGAFFSVNKMLSTDAFSA 163

Score = 31 (14.8 bits)
Expect = 0.71
Sum P(2) = 0.51

Identities = 6/12 (50%)
Positives = 8/12 (66%)
Query:    19 FGALAGLLIEIN 30
             FG  A LL++ N
Subject: 222 FGLTANLLVKAN 233

Accession: P49472
PHOTOSYSTEM II 44 KD REACTION CENTRE PROTEIN (P6 PROTEIN)
            (CP43).
            
Length = 471
Score = 37 (17.7 bits)
Expect = 0.84
Sum P(2) = 0.57

Identities = 8/21 (38%)
Positives = 13/21 (61%)
Query:    19 FGALAGLLIEINRFFPDALTF 39
             F A A +L E++ F P+  T+
Subject:  60 FWAGAMVLFEVSHFVPEKPTY 80

Score = 29 (13.8 bits)
Expect = 0.84
Sum P(2) = 0.57

Identities = 4/7 (57%)
Positives = 6/7 (85%)
Query:    38 TFPFFSF 44
             +FPFF +
Subject: 141 SFPFFGY 147

Accession: Q00111
HYPOTHETICAL GENE 45 PROTEIN.
            
Length = 240
Score = 52 (24.8 bits)
Expect = 1.1
P = 0.66

Identities = 10/27 (37%)
Positives = 16/27 (59%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLLI 27
             +R ++ Y+   P  STLW G + G +I
Subject:  44 IRPVQQYVCNGPCCSTLWAGPVPGYVI 70

Accession: P11650
CHALCONE--FLAVANONE ISOMERASE A (EC 5.5.1.6).
            
Length = 241
Score = 52 (24.8 bits)
Expect = 1.1
P = 0.66

Identities = 13/36 (36%)
Positives = 16/36 (44%)
Query:     9 SVAPVLSTLWFGALAGLLIEINRFFPDALTFPFFSF 44
             S  P L+  W G     L +   FF D +T PF  F
Subject:  59 SAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKF 94

Accession: P47317
PROBABLE CATION-TRANSPORTING P-TYPE ATPASE (EC 3.6.1.-).
            
Length = 874
Score = 38 (18.1 bits)
Expect = 1.1
Sum P(2) = 0.68

Identities = 8/25 (32%)
Positives = 14/25 (56%)
Query:    17 LWFGALAGLLIEINRFFPDALTFPF 41
             +W G+LA +L+ +   F + L   F
Subject: 810 VWIGSLASILVFLLIIFINPLGLVF 834

Score = 29 (13.8 bits)
Expect = 1.1
Sum P(2) = 0.68

Identities = 6/8 (75%)
Positives = 6/8 (75%)
Query:     3 DLKTYLSV 10
             DLKTY  V
Subject: 394 DLKTYYRV 401

Accession: P28493
PATHOGENESIS-RELATED PROTEIN 5 PRECURSOR (PR-5).
            
Length = 239
Score = 36 (17.2 bits)
Expect = 1.2
Sum P(2) = 0.69

Identities = 6/10 (60%)
Positives = 8/10 (80%)
Query:    15 STLWFGALAG 24
             +T+W G LAG
Subject:  34 TTVWAGTLAG 43

Score = 29 (13.8 bits)
Expect = 1.2
Sum P(2) = 0.69

Identities = 6/15 (40%)
Positives = 9/15 (60%)
Query:    23 AGLLIEINRFFPDAL 37
             AG + ++N   PD L
Subject: 149 AGCVSDLNAACPDML 163

Accession: P42345
FKBP-RAPAMYCIN ASSOCIATED PROTEIN (FRAP) (RAPAMYCIN
            TARGET PROTEIN).
            
Length = 2549
Score = 44 (21.0 bits)
Expect = 1.2
Sum P(2) = 0.70

Identities = 8/16 (50%)
Positives = 11/16 (68%)
Query:    25 LLIEINRFFPDALTFP 40
             LL +I R+ P AL +P
Subject:1960 LLTDIGRYHPQALIYP 1975

Score = 26 (12.4 bits)
Expect = 1.2
Sum P(2) = 0.70

Identities = 4/4 (100%)
Positives = 4/4 (100%)
Query:    16 TLWF 19
             TLWF
Subject:1908 TLWF 1911

Accession: P42346
FKBP-RAPAMYCIN ASSOCIATED PROTEIN (FRAP) (RAPAMYCIN TARGET
            PROTEIN).
            
Length = 2549
Score = 44 (21.0 bits)
Expect = 1.2
Sum P(2) = 0.70

Identities = 8/16 (50%)
Positives = 11/16 (68%)
Query:    25 LLIEINRFFPDALTFP 40
             LL +I R+ P AL +P
Subject:1960 LLTDIGRYHPQALIYP 1975

Score = 26 (12.4 bits)
Expect = 1.2
Sum P(2) = 0.70

Identities = 4/4 (100%)
Positives = 4/4 (100%)
Query:    16 TLWF 19
             TLWF
Subject:1908 TLWF 1911

Accession: P41245
92 KD TYPE IV COLLAGENASE PRECURSOR (EC 3.4.24.35) (92 KD
            GELATINASE) (MATRIX METALLOPROTEINASE-9) (MMP-9) (GELATINASE B).
            
Length = 730
Score = 36 (17.2 bits)
Expect = 1.3
Sum P(2) = 0.73

Identities = 5/11 (45%)
Positives = 9/11 (81%)
Query:    34 PDALTFPFFSF 44
             P+AL +P +S+
Subject: 415 PEALMYPLYSY 425

Score = 30 (14.3 bits)
Expect = 1.3
Sum P(2) = 0.73

Identities = 7/19 (36%)
Positives = 12/19 (63%)
Query:    10 VAPVLSTLWFGALAGLLIE 28
             VAP+  T  +G  A ++I+
Subject: 151 VAPLTFTRVYGPEADIVIQ 169

Accession: P22314
UBIQUITIN-ACTIVATING ENZYME E1 (A1S9 PROTEIN).
            
Length = 1058
Score = 29 (13.8 bits)
Expect = 4.7e+02
Sum P(2) = 1.0

Identities = 5/8 (62%)
Positives = 5/8 (62%)
Query:    37 LTFPFFSF 44
             L  PFF F
Subject: 929 LALPFFGF 936

Score = 29 (13.8 bits)
Expect = 4.7e+02
Sum P(2) = 1.0

Identities = 5/11 (45%)
Positives = 8/11 (72%)
Query:    12 PVLSTLWFGAL 22
             P++  L+F AL
Subject: 419 PIMQWLYFDAL 429

Score = 26 (12.4 bits)
Expect = 1.3
Sum P(3) = 0.73

Identities = 5/10 (50%)
Positives = 7/10 (70%)
Query:    29 INRFFPDALT 38
             ++ F PD LT
Subject: 726 LHNFPPDQLT 735

Accession: Q02053
UBIQUITIN-ACTIVATING ENZYME E1 1.
            
Length = 1058
Score = 29 (13.8 bits)
Expect = 4.7e+02
Sum P(2) = 1.0

Identities = 5/8 (62%)
Positives = 5/8 (62%)
Query:    37 LTFPFFSF 44
             L  PFF F
Subject: 929 LALPFFGF 936

Score = 29 (13.8 bits)
Expect = 4.7e+02
Sum P(2) = 1.0

Identities = 5/11 (45%)
Positives = 8/11 (72%)
Query:    12 PVLSTLWFGAL 22
             P++  L+F AL
Subject: 419 PIMQWLYFDAL 429

Score = 26 (12.4 bits)
Expect = 1.3
Sum P(3) = 0.73

Identities = 5/10 (50%)
Positives = 7/10 (70%)
Query:    29 INRFFPDALT 38
             ++ F PD LT
Subject: 726 LHNFPPDQLT 735

Accession: P50899
EXOGLUCANASE B PRECURSOR (EC 3.2.1.91)
            (EXOCELLOBIOHYDROLASE B) (1,4-BETA-CELLOBIOHYDROLASE B) (CBP120).
            
Length = 1090
Score = 41 (19.6 bits)
Expect = 1.4
Sum P(2) = 0.75

Identities = 9/20 (45%)
Positives = 11/20 (55%)
Query:    21 ALAGLLIEINRFFPDALTFP 40
             A+AG L +  R F D  T P
Subject: 680 AVAGALADYARLFDDGTTTP 699

Score = 26 (12.4 bits)
Expect = 1.4
Sum P(2) = 0.75

Identities = 5/9 (55%)
Positives = 5/9 (55%)
Query:    15 STLWFGALA 23
             S  WFG  A
Subject: 469 SNRWFGMQA 477

Accession: P09715
HYPOTHETICAL PROTEIN HQRF1.
            
Length = 846
Score = 38 (18.1 bits)
Expect = 1.5
Sum P(2) = 0.78

Identities = 7/18 (38%)
Positives = 10/18 (55%)
Query:     7 YLSVAPVLSTLWFGALAG 24
             +L++  VL   W G  AG
Subject: 346 WLALGAVLPARWLGCAAG 363

Score = 28 (13.4 bits)
Expect = 1.5
Sum P(2) = 0.78

Identities = 5/7 (71%)
Positives = 5/7 (71%)
Query:    34 PDALTFP 40
             PDA T P
Subject: 620 PDAATMP 626

Accession: P52219
HEME EXPORTER PROTEIN B (CYTOCHROME C-TYPE BIOGENESIS
            PROTEIN CCMB).
            
Length = 215
Score = 51 (24.3 bits)
Expect = 1.7
P = 0.81

Identities = 9/25 (36%)
Positives = 15/25 (60%)
Query:     9 SVAPVLSTLWFGALAGLLIEINRFF 33
             +V+ +   LW GAL   L+ ++R F
Subject:  43 TVSRIAGILWVGALLSCLLSLDRIF 67

Accession: P98161
POLYCYSTIN PRECURSOR (AUTOSOMAL DOMINANT POLYCYSTIC
            KIDNEY DISEASE PROTEIN 1).
            
Length = 4303
Score = 39 (18.6 bits)
Expect = 1.9
Sum P(2) = 0.84

Identities = 7/8 (87%)
Positives = 7/8 (87%)
Query:    17 LWFGALAG 24
             LW GALAG
Subject:  17 LWLGALAG 24

Score = 31 (14.8 bits)
Expect = 1.9
Sum P(2) = 0.84

Identities = 6/11 (54%)
Positives = 7/11 (63%)
Query:    29 INRFFPDALTF 39
             +   FPDA TF
Subject:1852 VTMVFPDAGTF 1862

Accession: P98055
CYTOCHROME C OXIDASE POLYPEPTIDE I HOMOLOG (EC 1.9.3.1).
            
Length = 539
Score = 51 (24.3 bits)
Expect = 1.9
P = 0.85

Identities = 9/25 (36%)
Positives = 15/25 (60%)
Query:    20 GALAGLLIEINRFFPDALTFPFFSF 44
             G L G+++ +   FPD    P+F+F
Subject:  86 GFLVGVVVALQLAFPDLNIAPYFNF 110

Accession: P08793
XANTHINE DEHYDROGENASE (EC 1.1.1.204) (XD).
            
Length = 1353
Score = 31 (14.8 bits)
Expect = 8.8e+02
Sum P(2) = 1.0

Identities = 6/23 (26%)
Positives = 13/23 (56%)
Query:     4 LKTYLSVAPVLSTLWFGALAGLL 26
             +K  + V  +  +++FGA   L+
Subject: 300 VKEMIDVQELEDSIYFGASVSLM 322

Score = 27 (12.9 bits)
Expect = 2.0
Sum P(3) = 0.86

Identities = 5/9 (55%)
Positives = 6/9 (66%)
Query:    27 IEINRFFPD 35
             IE   +FPD
Subject: 725 IEHKSYFPD 733

Score = 26 (12.4 bits)
Expect = 8.8e+02
Sum P(2) = 1.0

Identities = 4/10 (40%)
Positives = 8/10 (80%)
Query:    34 PDALTFPFFS 43
             P+AL + +F+
Subject:1169 PNALMYNYFT 1178

Accession: P02709
ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN PRECURSOR.
            
Length = 457
Score = 35 (16.7 bits)
Expect = 2.5
Sum P(2) = 0.92

Identities = 9/26 (34%)
Positives = 13/26 (50%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLL 26
             M+ L  Y  V  ++  L F  L GL+
Subject: 227 MQRLPLYFIVNVIIPCLLFSFLTGLV 252

Score = 30 (14.3 bits)
Expect = 2.5
Sum P(2) = 0.92

Identities = 6/9 (66%)
Positives = 8/9 (88%)
Query:    23 AGLLIEINR 31
             AG LIE+N+
Subject: 447 AGRLIELNQ 455

Accession: P02708
ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN PRECURSOR.
            
Length = 482
Score = 35 (16.7 bits)
Expect = 2.6
Sum P(2) = 0.93

Identities = 9/26 (34%)
Positives = 13/26 (50%)
Query:     1 MRDLKTYLSVAPVLSTLWFGALAGLL 26
             M+ L  Y  V  ++  L F  L GL+
Subject: 252 MQRLPLYFIVNVIIPCLLFSFLTGLV 277

Score = 30 (14.3 bits)
Expect = 2.6
Sum P(2) = 0.93

Identities = 6/9 (66%)
Positives = 8/9 (88%)
Query:    23 AGLLIEINR 31
             AG LIE+N+
Subject: 472 AGRLIELNQ 480

Accession: P09835
SENSOR PROTEIN UHPB (EC 2.7.3.-).
            
Length = 500
Score = 37 (17.7 bits)
Expect = 2.7
Sum P(2) = 0.93

Identities = 8/20 (40%)
Positives = 11/20 (55%)
Query:    24 GLLIEINRFFPDALTFPFFS 43
             GL  E++RF P  L  P  +
Subject: 202 GLPDELSRFTPFCLALPIIA 221

Score = 28 (13.4 bits)
Expect = 2.7
Sum P(2) = 0.93

Identities = 4/11 (36%)
Positives = 7/11 (63%)
Query:     8 LSVAPVLSTLW 18
             L++AP+    W
Subject: 149 LTLAPICLVFW 159

Accession: P36992
ALPHA-1-MICROGLOBULIN / INTER-ALPHA-TRYPSIN INHIBITOR LIGHT
            CHAIN PRECURSOR (PROTEIN HC) (HI-30) (FRAGMENT).
            
Length = 355
Score = 50 (23.9 bits)
Expect = 2.8
P = 0.94

Identities = 13/41 (31%)
Positives = 18/41 (43%)
Query:     4 LKTYLSVAPVLSTLWFGALAGLLIEINRFFPDALTFPFFSF 44
             LKT + + P+L   W G L GL +     +P    F    F
Subject:   2 LKTTVVLVPLLLLGWTGTLQGLPVLPEPLYPTQENFDLTRF 42

Accession: P32600
PHOSPHATIDYLINOSITOL 3-KINASE TOR2 (EC 2.7.1.137)
            (PI3-KINASE) (PTDINS-3-KINASE) (PI3K).
            
Length = 2473
Score = 39 (18.6 bits)
Expect = 2.9
Sum P(2) = 0.94

Identities = 7/12 (58%)
Positives = 8/12 (66%)
Query:    28 EINRFFPDALTF 39
             E  RF P+ LTF
Subject:1036 EFKRFVPETLTF 1047

Score = 38 (18.1 bits)
Expect = 3.9
Sum P(2) = 0.98

Identities = 7/20 (35%)
Positives = 12/20 (60%)
Query:    21 ALAGLLIEINRFFPDALTFP 40
             +L  LL ++ +  P AL +P
Subject:1895 SLLSLLSDLGKAHPQALVYP 1914

Score = 28 (13.4 bits)
Expect = 2.9
Sum P(2) = 0.94

Identities = 9/21 (42%)
Positives = 12/21 (57%)
Query:     9 SVAPVLSTLWFGALAGLLIEI 29
             SV+ VLS L   A+   + EI
Subject: 637 SVSEVLSKLLMIAITDPVAEI 657

Score = 28 (13.4 bits)
Expect = 3.9
Sum P(2) = 0.98

Identities = 5/6 (83%)
Positives = 5/6 (83%)
Query:    14 LSTLWF 19
             L TLWF
Subject:1845 LLTLWF 1850

WARNING:  HSPs involving 21 database sequences were not reported due to the
          limiting value of parameter B = 50.
Parameters:
  B=50
  V=500
  -ctxfactor=1.00
  E=10
  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.146   0.454    same    same    same
  Query
  Frame  MatID  Length  Eff.Length   E    S W   T  X     E2  S2
   +0      0       44        44      10. 48 3  11 21    0.19 26
Statistics:
  Query          Expected         Observed           HSPs       HSPs
  Frame  MatID  High Score       High Score       Reportable  Reported
   +0      0    48 (22.9 bits)  227 (108.3 bits)      126         88
  Query         Neighborhd  Word      Excluded    Failed   Successful  Overlaps
  Frame  MatID   Words      Hits        Hits    Extensions Extensions  Excluded
   +0      0       899     1722767      337086     1368486    17195        14
  Database:  sp.prot
    Release date:  unknown
    Posted date:  11:35 PM CDT Aug 21, 1997
  # of letters in database:  21,210,388
  # of sequences in database:  59,021
  # of database sequences satisfying E:  71
  No. of states in DFA:  351 (35 KB)
  Total size of DFA:  45 KB (64 KB)
  Time to generate neighborhood:  0.01u 0.01s 0.02t  Real: 00:00:00
  Time to search database:  3.56u 0.42s 3.98t  Real: 00:00:06
  Total cpu time:  3.59u 0.62s 4.21t  Real: 00:00:07
WARNINGS ISSUED:  1

sp|P12193|PSAJ_TOBAC_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___227__3.5e-28___1
sp|P12192|PSAJ_ORYSA_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___207__2.6e-25___1
sp|P19443|PSAJ_MAIZE_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___205__5.3e-25___1
sp|P12191|PSAJ_MARPO_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___186__2.8e-22___1
sp|P41613|PSAJ_PINTH_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___132__1.6e-14___1
sp|P49485|PSAJ_ODOSI_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___127__8.7e-14___1
sp|P23075|PSAJ_SYNVU_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___126__1.3e-13___1
sp|P30394|PSAJ_EUGGR_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___121__7.0e-13___1
sp|P25901|PSAJ_SYNEN_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___118__1.7e-12___1
sp|P48117|PSAJ_CYAPA_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___113__9.1e-12___1
sp|P51194|PSAJ_PORPU_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...___109__3.3e-11___1
sp|P23080|PSAJ_ANAVA_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...____74__3.4e-06___1
sp|P17230|PSAJ_SPIOL_PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...____69__4.8e-05___1
sp|P17229|PSAJ_PEA___PHOTOSYSTEM_I_REACTION_CENTRE_SUBUNI...____60__0.0012____1
sp|P31225|CBP1_CANAL_CORTICOSTEROID-BINDING_PROTEIN.____________44__0.0019____3
sp|P10905|UGPA_ECOLI_SN-GLYCEROL-3-PHOSPHATE_TRANSPORT_SY...____57__0.082_____1
sp|P33350|YEHN_ECOLI_HYPOTHETICAL_15.0_KD_PROTEIN_IN_MOLR...____37__0.082_____2
sp|P30606|ITR2_YEAST_MYO-INOSITOL_TRANSPORTER_2.________________31__0.14______3
sp|P45033|CCMB_HAEIN_HEME_EXPORTER_PROTEIN_B_(CYTOCHROME_...____37__0.17______2
sp|P33930|CCMB_ECOLI_HEME_EXPORTER_PROTEIN_B_(CYTOCHROME_...____41__0.22______2
sp|P51958|CC2_CARAU__CELL_DIVISION_CONTROL_PROTEIN_2_HOMO...____29__0.25______3
sp|P33346|YEHI_ECOLI_HYPOTHETICAL_138.1_KD_PROTEIN_IN_MOL...____31__0.32______3
sp|P51117|CFI_VITVI__CHALCONE--FLAVANONE_ISOMERASE_(EC_5....____54__0.34______1
sp|P28078|RNG6_MOUSE_CLASS_II_HISTOCOMPATIBILITY_ANTIGEN,...____35__0.35______2
sp|P32718|YJCT_ECOLI_HYPOTHETICAL_33.8_KD_PROTEIN_IN_FDHF...____54__0.36______1
sp|P48449|ERG7_HUMAN_LANOSTEROL_SYNTHASE_(EC_5.4.99.7)_(O...____38__0.40______2
sp|P48995|TRP1_HUMAN_TRP-1_PROTEIN._____________________________42__0.43______2
sp|P27668|UHPB_SALTY_SENSOR_PROTEIN_UHPB_(EC_2.7.3.-).__________39__0.48______2
sp|P47693|SYY_MYCGE__TYROSYL-TRNA_SYNTHETASE_(EC_6.1.1.1)...____35__0.51______2
sp|P49472|PSBC_ODOSI_PHOTOSYSTEM_II_44_KD_REACTION_CENTRE...____37__0.57______2
sp|Q00111|VG45_HSVI1_HYPOTHETICAL_GENE_45_PROTEIN.______________52__0.66______1
sp|P11650|CFIA_PETHY_CHALCONE--FLAVANONE_ISOMERASE_A_(EC_...____52__0.66______1
sp|P47317|ATCL_MYCGE_PROBABLE_CATION-TRANSPORTING_P-TYPE_...____38__0.68______2
sp|P28493|PR5_ARATH__PATHOGENESIS-RELATED_PROTEIN_5_PRECU...____36__0.69______2
sp|P42345|FRAP_HUMAN_FKBP-RAPAMYCIN_ASSOCIATED_PROTEIN_(F...____44__0.70______2
sp|P42346|FRAP_RAT___FKBP-RAPAMYCIN_ASSOCIATED_PROTEIN_(F...____44__0.70______2
sp|P41245|COG9_MOUSE_92_KD_TYPE_IV_COLLAGENASE_PRECURSOR_...____36__0.73______2
sp|P22314|UBA1_HUMAN_UBIQUITIN-ACTIVATING_ENZYME_E1_(A1S9...____29__0.73______3
sp|Q02053|UBA1_MOUSE_UBIQUITIN-ACTIVATING_ENZYME_E1_1.__________29__0.73______3
sp|P50899|GUXB_CELFI_EXOGLUCANASE_B_PRECURSOR_(EC_3.2.1.9...____41__0.75______2
sp|P09715|IRS1_HCMVA_HYPOTHETICAL_PROTEIN_HQRF1.________________38__0.78______2
sp|P52219|CCMB_PARDE_HEME_EXPORTER_PROTEIN_B_(CYTOCHROME_...____51__0.81______1
sp|P98161|PKD1_HUMAN_POLYCYSTIN_PRECURSOR_(AUTOSOMAL_DOMI...____39__0.84______2
sp|P98055|FIXN_AGRTU_CYTOCHROME_C_OXIDASE_POLYPEPTIDE_I_H...____51__0.85______1
sp|P08793|XDH_CALVI__XANTHINE_DEHYDROGENASE_(EC_1.1.1.204...____31__0.86______3
sp|P02709|ACHA_BOVIN_ACETYLCHOLINE_RECEPTOR_PROTEIN,_ALPH...____35__0.92______2
sp|P02708|ACHA_HUMAN_ACETYLCHOLINE_RECEPTOR_PROTEIN,_ALPH...____35__0.93______2
sp|P09835|UHPB_ECOLI_SENSOR_PROTEIN_UHPB_(EC_2.7.3.-).__________37__0.93______2
sp|P36992|HC_PLEPL___ALPHA-1-MICROGLOBULIN_/_INTER-ALPHA-...____50__0.94______1
sp|P32600|TOR2_YEAST_PHOSPHATIDYLINOSITOL_3-KINASE_TOR2_(...____39__0.94______2
sp|P47982|EST6_DROMA_ESTERASE_6_PRECURSOR_(EC_3.1.1.1)_(E...____39__0.95______2
sp|Q08662|EST6_DROSI_ESTERASE_6_PRECURSOR_(EC_3.1.1.1)_(E...____39__0.95______2
sp|Q02479|VIE2_HSVB4_IMMEDIATE-EARLY_PROTEIN_2_(IE2).___________39__0.95______2
sp|Q09779|YA8E_SCHPO_HYPOTHETICAL_PROTEIN_C22F3.14C_IN_CH...____30__0.97______3
sp|P30072|YCF2_EPIVI_HYPOTHETICAL_260_KD_PROTEIN_(ORF_2216).____36__0.97______2
sp|P10330|NU5M_OENBE_NADH-UBIQUINONE_OXIDOREDUCTASE_CHAIN...____38__0.97______2
sp|P11651|CFIB_PETHY_CHALCONE--FLAVANONE_ISOMERASE_B_(EC_...____49__0.98______1
sp|P31898|CYBH_ALCEU_PROBABLE_NI/FE-HYDROGENASE_B-TYPE_CY...____49__0.98______1
sp|P98157|LRP1_CHICK_LOW-DENSITY_LIPOPROTEIN_RECEPTOR-REL...____35__0.991_____2
sp|P06934|AANT_HDVIT_DELTA_ANTIGEN_(ALPHA_ANTIGEN)._____________35__0.997_____2
sp|P37873|SP2M_BACSU_STAGE_II_SPORULATION_PROTEIN_M.____________32__0.997_____2
sp|P38735|YHD5_YEAST_PROBABLE_ATP-DEPENDENT_PERMEASE_YHL0...____28__0.998_____3
sp|P45444|DYHC_EMENI_DYNEIN_HEAVY_CHAIN,_CYTOSOLIC_(DYHC).______40__0.998_____2
sp|P37514|YYAJ_BACSU_HYPOTHETICAL_49.7_KD_PROTEIN_IN_TETB...____35__0.998_____2
sp|P53239|COXT_YEAST_CYTOCHROME_C_OXIDASE_ASSEMBLY_PROTEI...____48__0.998_____1
sp|P38720|6PGD_YEAST_6-PHOSPHOGLUCONATE_DEHYDROGENASE,_DE...____35__0.999_____2
sp|P38374|YSY6_YEAST_YSY6_PROTEIN.______________________________46__0.9996____1
sp|P46968|DAD1_MOUSE_DEFENDER_AGAINST_CELL_DEATH_1_(DAD-1)._____31__0.9998____2
sp|P29960|CCMB_RHOCA_HEME_EXPORTER_PROTEIN_B_(CYTOCHROME_...____47__0.9999____1
sp|P52569|CTR2_HUMAN_LOW-AFFINITY_CATIONIC_AMINO_ACID_TRA...____38__0.9999____2
sp|Q03032|DCOG_SALTY_OXALOACETATE_DECARBOXYLASE_GAMMA_CHA...____46__0.99993___1