Accession: P12355
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III PRECURSOR
(LIGHT-HARVESTING COMPLEX I 17 KD PROTEIN) (PSI-F).
Length = 231
Score = 1189 (545.7 bits)
Expect = 1.4e-160
P = 1.4e-160
Identities = 231/231 (100%)
Positives = 231/231 (100%)
Query: 1 MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL
Subject: 1 MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
Query: 61 SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK
Subject: 61 SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Subject: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 231
YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF
Subject: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 231
Accession: P46486
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III PRECURSOR
(LIGHT-HARVESTING COMPLEX I 17 KD PROTEIN) (PSI-F).
Length = 232
Score = 764 (350.6 bits)
Expect = 3.6e-106
Sum P(2) = 3.6e-106
Identities = 149/180 (82%)
Positives = 159/180 (88%)
Query: 49 KVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKL 108
K A +A S +L S +V A ADI+GLTPCKESKQFAKREKQ+LKKL++SLKL
Subject: 50 KSSLKALSAALALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKL 109
Query: 109 YADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFL 168
YA DSAPALAIKATMEKTK+RFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPGILFL
Subject: 110 YAPDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFL 169
Query: 169 YIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVD 228
YIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLA+ LLFRGFSWPVAAYRE LNGEL+D
Subject: 170 YIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELID 229
Score = 40 (18.4 bits)
Expect = 3.6e-106
Sum P(2) = 3.6e-106
Identities = 8/13 (61%)
Positives = 10/13 (76%)
Query: 1 MSFTIPTNLYKPL 13
MSFTI T+ +PL
Subject: 1 MSFTISTSFLQPL 13
Accession: P13192
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III PRECURSOR
(LIGHT-HARVESTING COMPLEX I 17 KD PROTEIN) (PSI-F).
Length = 235
Score = 720 (330.4 bits)
Expect = 8.3e-96
P = 8.3e-96
Identities = 136/173 (78%)
Positives = 156/173 (90%)
Query: 55 AAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSA 114
+AALALSSVLLSS + +P A ADIAGLTPCKESK FAKREKQ++KKL +SLK YA DSA
Subject: 55 SAALALSSVLLSSAATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSA 114
Query: 115 PALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWI 174
PALAI+AT++KTK+RF+NYGK+GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWI
Subject: 115 PALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWI 174
Query: 175 GWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227
GWVGRSYLIA+ EKKP +EIIIDV LA+ ++ RGF WPVAAYREL+NG+LV
Subject: 175 GWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLV 227
Accession: P12356
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III PRECURSOR
(LIGHT-HARVESTING COMPLEX I 17 KD PROTEIN) (PSI-F) (P21 PROTEIN).
Length = 227
Score = 299 (137.2 bits)
Expect = 4.1e-67
Sum P(2) = 4.1e-67
Identities = 61/101 (60%)
Positives = 73/101 (72%)
Query: 49 KVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKL 108
+ + ALA S++ + AP AAMADIAGLTPC ESK +AK EK+ LK L+ LK
Subject: 34 ETASKVGTALAASALAAAVSLSAPSAAMADIAGLTPCSESKAYAKLEKKELKTLEKRLKQ 93
Query: 109 YADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLI 149
Y DSAPA+A+KATME+TK RF NY K GLLCG+DGLPHLI
Subject: 94 YEADSAPAVALKATMERTKARFANYAKAGLLCGNDGLPHLI 134
Score = 221 (101.4 bits)
Expect = 4.1e-67
Sum P(2) = 4.1e-67
Identities = 42/73 (57%)
Positives = 54/73 (73%)
Query: 156 HWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPV 215
H GE P FLY+AG+IG+VGR YLIA++ E KPT KEIIIDVPLA+ L ++G WP+
Subject: 145 HAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIIDVPLATKLAWQGAGWPL 204
Query: 216 AAYRELLNGELVD 228
AA +EL G L++
Subject: 205 AAVQELQRGTLLE 217
Score = 50 (22.9 bits)
Expect = 7.5e-27
Sum P(2) = 7.5e-27
Identities = 18/61 (29%)
Positives = 29/61 (47%)
Query: 41 QPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALK 100
Q +K E A A AA AL++ + S A A +A + + K + K+E + L+
Subject: 29 QAQKNETASKVGTALAASALAAAVSLSAPSAAMADIAGLTPCSESKAYAKLEKKELKTLE 88
Query: 101 K 101
K
Subject: 89 K 89
Score = 39 (17.9 bits)
Expect = 5.2e-25
Sum P(2) = 5.2e-25
Identities = 12/32 (37%)
Positives = 17/32 (53%)
Query: 40 QQPKKLELAKVGANAAAALALSSVLLSSWSVA 71
Q K +KVG AA+ ++V LS+ S A
Subject: 29 QAQKNETASKVGTALAASALAAAVSLSAPSAA 60
Score = 34 (15.6 bits)
Expect = 3.4e-24
Sum P(2) = 3.4e-24
Identities = 15/63 (23%)
Positives = 24/63 (38%)
Query: 35 QENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKR 94
Q+N+ LA AA +L+ S ++ + + + KE K KR
Subject: 31 QKNETASKVGTALAASALAAAVSLSAPSAAMADIAGLTPCSESKAYAKLEKKELKTLEKR 90
Query: 95 EKQ 97
KQ
Subject: 91 LKQ 93
Accession: P51193
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III (PSI-F).
Length = 185
Score = 461 (211.6 bits)
Expect = 6.3e-60
P = 6.3e-60
Identities = 85/159 (53%)
Positives = 112/159 (70%)
Query: 72 PDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFD 131
P A++AGL PCK+S F KR ++KKLQA L Y ++ PALA+ +EKTK RF
Subject: 19 PIVVNAEVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTRFA 78
Query: 132 NYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKP 191
YG+ GLLCG+DGLPHLI G G+F+ PG+LFLYI GWIGWVGR YL+++ KP
Subject: 79 TYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKP 138
Query: 192 TQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNN 230
T+KEII+DVPLA + GF+WP+AA++E +G+L+ N
Subject: 139 TEKEIILDVPLAVKFMSSGFAWPLAAWQEFSSGQLIAPN 177
Accession: P49483
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III (PSI-F).
Length = 185
Score = 437 (200.5 bits)
Expect = 1.3e-56
P = 1.3e-56
Identities = 81/159 (50%)
Positives = 110/159 (69%)
Query: 69 SVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKK 128
S+ P+ A+ADI GLT C ES F KR K ++KKL+ + Y S PALA++ +E+T+
Subject: 16 SLFPNRALADIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERTQA 75
Query: 129 RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDE 188
RFD Y + LLCG+DGLPHLI G H EFI PG F+YI+GWIGWVGR YL A+
Subject: 76 RFDKYSRSELLCGTDGLPHLIADGRWSHAAEFILPGFGFIYISGWIGWVGRKYLRAVSTT 135
Query: 189 KKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227
K PT+ EIII+VPLA ++ G+ WP++A++E ++ +LV
Subject: 136 KNPTESEIIINVPLALKIMTTGYIWPISAWQEFISNDLV 174
Accession: P48115
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III (PSI-F).
Length = 186
Score = 416 (190.9 bits)
Expect = 1.0e-53
P = 1.0e-53
Identities = 79/150 (52%)
Positives = 104/150 (69%)
Query: 77 ADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKY 136
AD+AGL PC +S F +R K ++L+ LK Y SAPA A++ ++KT++RFD Y
Subject: 25 ADVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNS 84
Query: 137 GLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEI 196
GLLCG+DGLPHLI G H GEF PG+LFLYIAG+IGW GRSYL A+ T+KEI
Subject: 85 GLLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTEKEI 144
Query: 197 IIDVPLASSLLFRGFSWPVAAYRELLNGEL 226
IID+P+A + +GF WP+AA +E +G+L
Subject: 145 IIDIPVALQSVSKGFVWPLAALQEFSSGKL 174
Accession: P25899
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III PRECURSOR.
Length = 164
Score = 305 (140.0 bits)
Expect = 3.6e-48
Sum P(2) = 3.6e-48
Identities = 54/88 (61%)
Positives = 68/88 (77%)
Query: 139 LCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIII 198
LCG DGLPHL+V G G+F+ P +LFLYIAGWIGWVGR+YLIA+R+ + +KEIII
Subject: 65 LCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKEIII 124
Query: 199 DVPLASSLLFRGFSWPVAAYRELLNGEL 226
DVPLA + GF+WP+AA +EL +GEL
Subject: 125 DVPLAIKCMLTGFAWPLAALKELASGEL 152
Score = 78 (35.8 bits)
Expect = 3.6e-48
Sum P(2) = 3.6e-48
Identities = 16/37 (43%)
Positives = 22/37 (59%)
Query: 63 VLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQAL 99
++L+ W A AD+AGL PCK+S F KR A+
Subject: 9 LVLTLWLGFTPLASADVAGLVPCKDSPAFQKRAAAAV 45
Accession: P29256
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III PRECURSOR.
Length = 165
Score = 290 (133.1 bits)
Expect = 2.5e-44
Sum P(2) = 2.5e-44
Identities = 53/89 (59%)
Positives = 65/89 (73%)
Query: 139 LCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIII 198
LCG +G PHLIV G H G+F+ P ILFLYIAGWIGWVGRSYLI IR+ K P +E++I
Subject: 66 LCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKNPEMQEVVI 125
Query: 199 DVPLASSLLFRGFSWPVAAYRELLNGELV 227
+VPLA + GF WP+AA E +G+LV
Subject: 126 NVPLAIKKMLGGFLWPLAAVGEYTSGKLV 154
Score = 65 (29.8 bits)
Expect = 2.5e-44
Sum P(2) = 2.5e-44
Identities = 15/42 (35%)
Positives = 21/42 (50%)
Query: 58 LALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQAL 99
LAL ++ AP A+ D A LTPC E+ + + K L
Subject: 5 LALLLAFTLWFNFAPSASADDFANLTPCSENPAYLAKSKNFL 46
Accession: P42048
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III (PHOTOSYSTEM I
18.5 KD PROTEIN) (PSI-F) (PS I SUBUNIT 7) (FRAGMENT).
Length = 26
Score = 105 (48.2 bits)
Expect = 9.9e-08
P = 9.9e-08
Identities = 20/26 (76%)
Positives = 22/26 (84%)
Query: 78 DIAGLTPCKESKQFAKREKQALKKLQ 103
DI+GLTPCKESKQF KREKQ K L+
Subject: 1 DISGLTPCKESKQFXKREKQQXKXLE 26
Accession: P20119
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III (LIGHT-HARVESTING
COMPLEX I 17 KD PROTEIN) (PSI-F) (FRAGMENT).
Length = 20
Score = 95 (43.6 bits)
Expect = 3.3e-06
P = 3.3e-06
Identities = 18/19 (94%)
Positives = 19/19 (100%)
Query: 79 IAGLTPCKESKQFAKREKQ 97
I+GLTPCKESKQFAKREKQ
Subject: 2 ISGLTPCKESKQFAKREKQ 20
Accession: P13193
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III
(LIGHT-HARVESTING COMPLEX I 17 KD PROTEIN) (PSI-F) (FRAGMENT).
Length = 20
Score = 69 (31.7 bits)
Expect = 0.015
P = 0.014
Identities = 15/18 (83%)
Positives = 15/18 (83%)
Query: 79 IAGLTPCKESKQFAKREK 96
IAGLTP KESK FAK EK
Subject: 2 IAGLTPPKESKAFAKXEK 19
Accession: P31083
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III (FRAGMENT).
Length = 29
Score = 57 (26.2 bits)
Expect = 0.48
P = 0.38
Identities = 11/21 (52%)
Positives = 15/21 (71%)
Query: 78 DIAGLTPCKESKQFAKREKQA 98
D+AGLTP ES +F +R + A
Subject: 1 DVAGLTPTSESPRFIQRAEAA 21
Accession: P23078
PHOTOSYSTEM I REACTION CENTRE SUBUNIT III (FRAGMENT).
Length = 27
Score = 56 (25.7 bits)
Expect = 0.72
P = 0.51
Identities = 11/22 (50%)
Positives = 14/22 (63%)
Query: 78 DIAGLTPCKESKQFAKREKQAL 99
D+AGL P K+S F KR A+
Subject: 1 DVAGLVPAKDSPAFQKRAAAAV 22
Accession: P16170
NEURAL CELL ADHESION MOLECULE 1, LARGE ISOFORM PRECURSOR
(N-CAM 180) (CONTAINS: N-CAM 140).
Length = 1088
Score = 64 (29.4 bits)
Expect = 1.4
P = 0.75
Identities = 14/41 (34%)
Positives = 23/41 (56%)
Query: 6 PTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLE 46
PT + KP+ T P + +S P K V Q+++ + P+K E
Subject: 923 PTVIIKPVTTVPPNAASPPPTPEPKQVKQEQSGTKSPEKEE 963
Accession: P34590
HYPOTHETICAL 37.3 KD PROTEIN ZC21.6 IN CHROMOSOME III.
Length = 326
Score = 63 (28.9 bits)
Expect = 1.7
P = 0.82
Identities = 13/33 (39%)
Positives = 16/33 (48%)
Query: 150 VSGDQRHWGEFITPGILFLYIAGWIGWVGRSYL 182
VS RHWG + GI + AG G +YL
Subject: 161 VSSYHRHWGSMLRLGIHLILFAGTCALTGTAYL 193
Accession: P36335
NEURAL CELL ADHESION MOLECULE 2, LARGE ISOFORM PRECURSOR
(N-CAM 180) (CONTAINS: N-CAM 140).
Length = 1092
Score = 63 (28.9 bits)
Expect = 1.9
P = 0.85
Identities = 13/39 (33%)
Positives = 22/39 (56%)
Query: 6 PTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKK 44
PT + KP+ T P + +S P K V Q+++ + P+K
Subject: 927 PTAIIKPVTTVPANTTSPPPTPEPKQVKQEQSGTKSPEK 965
Accession: P28906
HEMOPOIETIC PROGENITOR CELL ANTIGEN CD34 PRECURSOR.
Length = 373
Score = 60 (27.5 bits)
Expect = 2.5
Sum P(2) = 0.92
Identities = 16/51 (31%)
Positives = 24/51 (47%)
Query: 52 ANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKL 102
A+A A + S+LL+ V P + +A T Q K+ + LKKL
Subject: 208 ADADAGAQVCSLLLAQSEVRPQCLLLVLANRTEISSKLQLMKKHQSDLKKL 258
Score = 35 (16.1 bits)
Expect = 2.5
Sum P(2) = 0.92
Identities = 9/26 (34%)
Positives = 13/26 (50%)
Query: 5 IPTNLYKPLATKPKHLSSSSFAPRSK 30
+ TN+ T P L S+S P S+
Subject: 40 VSTNVSYQETTTPSTLGSTSLHPVSQ 65
Score = 34 (15.6 bits)
Expect = 3.4
Sum P(2) = 0.97
Identities = 9/27 (33%)
Positives = 12/27 (44%)
Query: 3 FTIPTNLYKPLATKPKHLSSSSFAPRS 29
FT P N+ P T LS + + S
Subject: 109 FTTPANVSTPETTLKPSLSPGNVSDLS 135
Accession: P54623
CENTROSOMIN.
Length = 1033
Score = 62 (28.5 bits)
Expect = 2.7
P = 0.93
Identities = 16/53 (30%)
Positives = 26/53 (49%)
Query: 79 IAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFD 131
I +T E A+ +++ L+KL +L DD++P TME + FD
Subject: 29 IETVTSFLEENGAAEIDRRVLRKLAEALSKSIDDTSPGALQDVTMENSYASFD 81
Accession: P03612
COAT PROTEIN.
Length = 129
Score = 55 (25.2 bits)
Expect = 3.5
Sum P(2) = 0.97
Identities = 13/31 (41%)
Positives = 18/31 (58%)
Query: 196 IIIDVPLASSLLFRGFSWPVAAYRELLNGEL 226
I ++VP ++ G PVAA+R LN EL
Subject: 60 IKVEVPKVATQTVGGVELPVAAWRSYLNMEL 90
Score = 33 (15.1 bits)
Expect = 3.5
Sum P(2) = 0.97
Identities = 7/25 (28%)
Positives = 12/25 (48%)
Query: 20 LSSSSFAPRSKIVCQQENDQQQPKK 44
+SS+S + K+ C Q +K
Subject: 33 ISSNSRSQAYKVTCSVRQSSAQNRK 57
Accession: P03613
COAT PROTEIN.
Length = 129
Score = 55 (25.2 bits)
Expect = 3.5
Sum P(2) = 0.97
Identities = 13/31 (41%)
Positives = 18/31 (58%)
Query: 196 IIIDVPLASSLLFRGFSWPVAAYRELLNGEL 226
I ++VP ++ G PVAA+R LN EL
Subject: 60 IKVEVPKVATQTVGGVELPVAAWRSYLNMEL 90
Score = 33 (15.1 bits)
Expect = 3.5
Sum P(2) = 0.97
Identities = 7/25 (28%)
Positives = 12/25 (48%)
Query: 20 LSSSSFAPRSKIVCQQENDQQQPKK 44
+SS+S + K+ C Q +K
Subject: 33 ISSNSRSQAYKVTCSVRQSSAQNRK 57
Accession: Q08168
58 KD PHOSPHOPROTEIN (HEAT SHOCK-RELATED PROTEIN) (HRP).
Length = 423
Score = 51 (23.4 bits)
Expect = 4.0
Sum P(2) = 0.98
Identities = 12/22 (54%)
Positives = 14/22 (63%)
Query: 86 KESKQFAKREKQALKKLQASLK 107
+E KQ KREK+ KKL A K
Subject: 241 EEEKQRLKREKELKKKLAAKKK 262
Score = 43 (19.7 bits)
Expect = 4.0
Sum P(2) = 0.98
Identities = 10/26 (38%)
Positives = 14/26 (53%)
Query: 34 QQENDQQQPKKLELAKVGANAAAALA 59
++E + P+KLEL K A LA
Subject: 73 EEEEEDDDPEKLELIKEEAVECPPLA 98
Accession: P03611
COAT PROTEIN.
Length = 129
Score = 54 (24.8 bits)
Expect = 4.8
Sum P(2) = 0.99
Identities = 13/31 (41%)
Positives = 18/31 (58%)
Query: 196 IIIDVPLASSLLFRGFSWPVAAYRELLNGEL 226
I ++VP ++ G PVAA+R LN EL
Subject: 60 IKVEVPKVATQTVGGVELPVAAWRSYLNLEL 90
Score = 33 (15.1 bits)
Expect = 4.8
Sum P(2) = 0.99
Identities = 7/25 (28%)
Positives = 12/25 (48%)
Query: 20 LSSSSFAPRSKIVCQQENDQQQPKK 44
+SS+S + K+ C Q +K
Subject: 33 ISSNSRSQAYKVTCSVRQSSAQNRK 57
Accession: P12905
LARGE T ANTIGEN.
Length = 777
Score = 60 (27.5 bits)
Expect = 5.0
P = 0.99
Identities = 10/29 (34%)
Positives = 19/29 (65%)
Query: 108 LYADDSAPALAIKATMEKTKKRFDNYGKY 136
+Y++ + PA + +T EK K+ +D GK+
Subject: 299 IYSNKTFPAFLVYSTKEKCKQLYDTIGKF 327
Accession: P03074
LARGE T ANTIGEN.
Length = 782
Score = 60 (27.5 bits)
Expect = 5.0
P = 0.99
Identities = 10/29 (34%)
Positives = 19/29 (65%)
Query: 108 LYADDSAPALAIKATMEKTKKRFDNYGKY 136
+Y++ + PA + +T EK K+ +D GK+
Subject: 304 IYSNKTFPAFLVYSTKEKCKQLYDTIGKF 332
Accession: P03073
LARGE T ANTIGEN.
Length = 785
Score = 60 (27.5 bits)
Expect = 5.0
P = 0.99
Identities = 10/29 (34%)
Positives = 19/29 (65%)
Query: 108 LYADDSAPALAIKATMEKTKKRFDNYGKY 136
+Y++ + PA + +T EK K+ +D GK+
Subject: 304 IYSNKTFPAFLVYSTKEKCKQLYDTIGKF 332
Accession: P53250
HYPOTHETICAL 37.1 KD PROTEIN IN PAC10-TOM20 INTERGENIC
REGION.
Length = 332
Score = 52 (23.9 bits)
Expect = 5.4
Sum P(2) = 1.0
Identities = 13/41 (31%)
Positives = 21/41 (51%)
Query: 87 ESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTK 127
E Q ++QAL + S+KL + DSA L++ + K
Subject: 144 EEMQIEINKQQALLRKNTSVKLVSQDSASPLSLTFRVNSEK 184
Score = 40 (18.4 bits)
Expect = 5.4
Sum P(2) = 1.0
Identities = 8/25 (32%)
Positives = 15/25 (60%)
Query: 185 IRDEKKPTQKEIIIDVPLASSLLFR 209
++ + P+ E+ ID+P S +FR
Subject: 212 VQSDTCPSVDELYIDLPGPSYTIFR 236
Accession: P33029
HYPOTHETICAL 54.0 KD PROTEIN IN FRUK 5'REGION.
Length = 488
Score = 58 (26.6 bits)
Expect = 6.3
Sum P(2) = 1.0
Identities = 13/37 (35%)
Positives = 21/37 (56%)
Query: 141 GSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWV 177
GS LP +++G + H G +L L +AGW+ +V
Subject: 373 GSQKLPQRMLAGIRIHQGRETDWSLLALGVAGWMRYV 409
Score = 35 (16.1 bits)
Expect = 6.3
Sum P(2) = 1.0
Identities = 8/17 (47%)
Positives = 10/17 (58%)
Query: 104 ASLKLYADDSAPALAIK 120
A+ L D+ AP L IK
Subject: 326 AARTLMLDEQAPTLQIK 342
Accession: P36670
AMPG PROTEIN.
Length = 491
Score = 47 (21.6 bits)
Expect = 6.4
Sum P(2) = 1.0
Identities = 8/27 (29%)
Positives = 14/27 (51%)
Query: 158 GEFITPGILFLYIAGWIGWVGRSYLIA 184
G ++ G+ W+GW G +L+A
Subject: 155 GMLVSGGLALWLADKWLGWQGMYWLMA 181
Score = 46 (21.1 bits)
Expect = 6.4
Sum P(2) = 1.0
Identities = 11/29 (37%)
Positives = 16/29 (55%)
Query: 40 QQPKKLELAKVGANAAAALALSSVLLSSW 68
QQP+ L +G + LAL+S L +W
Subject: 10 QQPRSAILLILGFASGLPLALTSGTLQAW 38
Accession: Q05606
BIOPOLYMER TRANSPORT EXBD PROTEIN.
Length = 142
Score = 58 (26.6 bits)
Expect = 6.8
P = 1.0
Identities = 18/60 (30%)
Positives = 25/60 (41%)
Query: 53 NAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADD 112
N + + VLL + VA A DI P +K + EK ++A KLY D
Subject: 19 NVTPFIDVMLVLLIIFMVAAPLATVDIKVDLPASTAKPAPRPEKPVFVSVKADQKLYVGD 78
Accession: P41511
DNA TOPOISOMERASE I (EC 5.99.1.2).
Length = 1019
Score = 53 (24.3 bits)
Expect = 7.4
Sum P(2) = 1.0
Identities = 13/31 (41%)
Positives = 17/31 (54%)
Query: 11 KPLATKPKHLSSSSFAPRSKIVCQQENDQQQ 41
KPLA +PK S S AP + V Q Q++
Subject: 46 KPLAKRPKVEDSDSDAPLTSTVSSQNGVQKR 76
Score = 42 (19.3 bits)
Expect = 7.4
Sum P(2) = 1.0
Identities = 12/48 (25%)
Positives = 24/48 (50%)
Query: 81 GLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKK 128
GLT + + K+ K +++++S+K + D +KA E K+
Subject: 719 GLTGDDGTPKKGKKAKNVEEEVRSSIKGFKDKKQVDEELKALNETAKR 766
Accession: P49425
MANNAN ENDO-1,4-BETA-MANNOSIDASE (EC 3.2.1.78).
Length = 968
Score = 52 (23.9 bits)
Expect = 9.5
Sum P(2) = 1.0
Identities = 11/25 (44%)
Positives = 15/25 (60%)
Query: 105 SLKLYADDSAPALAIKATMEKTKKR 129
SL+ + D AP L +EKTK+R
Subject: 386 SLRRFPDKDAPVLYFVNQLEKTKRR 410
Score = 42 (19.3 bits)
Expect = 9.5
Sum P(2) = 1.0
Identities = 5/13 (38%)
Positives = 9/13 (69%)
Query: 173 WIGWVGRSYLIAI 185
WI W GR ++++
Subject: 635 WIAWAGRDGIVSL 647
Parameters:
B=100
H=1
V=500
-ctxfactor=1.00
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.392 same same same
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 231 231 10. 59 3 11 22 0.21 33
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 63 (28.9 bits) 1189 (545.7 bits) 50 50
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 5369 9567540 2029613 7519566 18361 161
Database: sp.prot
Release date: unknown
Posted date: 11:35 PM CDT Aug 21, 1997
# of letters in database: 21,210,388
# of sequences in database: 59,021
# of database sequences satisfying E: 32
No. of states in DFA: 564 (56 KB)
Total size of DFA: 113 KB (128 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Real: 00:00:00
Time to search database: 16.13u 0.06s 16.19t Real: 00:00:16
Total cpu time: 16.16u 0.09s 16.25t Real: 00:00:16