Accession: P10098
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 115 (53.9 bits)
Expect = 4.3e-12
P = 4.3e-12
Identities = 21/21 (100%)
Positives = 21/21 (100%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYLWHETTRSMGLGY
Subject: 60 DFLSVRVYLWHETTRSMGLGY 80
Accession: P10793
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 109 (51.1 bits)
Expect = 8.9e-11
P = 8.9e-11
Identities = 20/21 (95%)
Positives = 20/21 (95%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYLWHETTRSMGL Y
Subject: 60 DFLSVRVYLWHETTRSMGLAY 80
Accession: P41649
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 109 (51.1 bits)
Expect = 8.9e-11
P = 8.9e-11
Identities = 20/21 (95%)
Positives = 20/21 (95%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYLWHETTRSMGL Y
Subject: 60 DFLSVRVYLWHETTRSMGLAY 80
Accession: P25252
PHOTOSYSTEM I IRON-SULFUR CENTER 1 (PHOTOSYSTEM I SUBUNIT
VII-1) (9 KD POLYPEPTIDE 1) (PSI-C-1).
Length = 80
Score = 109 (51.1 bits)
Expect = 8.9e-11
P = 8.9e-11
Identities = 20/21 (95%)
Positives = 20/21 (95%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYLWHETTRSMGL Y
Subject: 60 DFLSVRVYLWHETTRSMGLAY 80
Accession: P07136
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 109 (51.1 bits)
Expect = 8.9e-11
P = 8.9e-11
Identities = 20/21 (95%)
Positives = 20/21 (95%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYLWHETTRSMGL Y
Subject: 60 DFLSVRVYLWHETTRSMGLAY 80
Accession: P31173
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 91 (42.7 bits)
Expect = 1.6e-07
P = 1.6e-07
Identities = 18/21 (85%)
Positives = 19/21 (90%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLS+RVYL ETTRSMGLGY
Subject: 60 DFLSIRVYLGAETTRSMGLGY 80
Accession: P06251
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 89 (41.7 bits)
Expect = 3.4e-07
P = 3.4e-07
Identities = 18/21 (85%)
Positives = 19/21 (90%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYL +ETTRSMGL Y
Subject: 60 DFLSVRVYLGNETTRSMGLSY 80
Accession: P51374
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 86 (40.3 bits)
Expect = 1.0e-06
P = 1.0e-06
Identities = 18/21 (85%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYL ETTRSMGL Y
Subject: 60 DFLSVRVYLGAETTRSMGLAY 80
Accession: P23392
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 85 (39.9 bits)
Expect = 1.5e-06
P = 1.5e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLS+RVYL ETTRSMGL Y
Subject: 60 DFLSIRVYLGAETTRSMGLAY 80
Accession: P23810
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 85 (39.9 bits)
Expect = 1.5e-06
P = 1.5e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLS+RVYL ETTRSMGL Y
Subject: 60 DFLSIRVYLGAETTRSMGLAY 80
Accession: P18083
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 85 (39.9 bits)
Expect = 1.5e-06
P = 1.5e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLS+RVYL ETTRSMGL Y
Subject: 60 DFLSIRVYLGAETTRSMGLAY 80
Accession: P31087
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 85 (39.9 bits)
Expect = 1.5e-06
P = 1.5e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLS+RVYL ETTRSMGL Y
Subject: 60 DFLSIRVYLGAETTRSMGLAY 80
Accession: P31085
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 85 (39.9 bits)
Expect = 1.5e-06
P = 1.5e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLS+RVYL ETTRSMGL Y
Subject: 60 DFLSIRVYLGAETTRSMGLAY 80
Accession: P32422
PHOTOSYSTEM I IRON-SULFUR CENTER 2 (PHOTOSYSTEM I SUBUNIT
VII-2) (9 KD POLYPEPTIDE 2) (PSI-C-2).
Length = 80
Score = 85 (39.9 bits)
Expect = 1.5e-06
P = 1.5e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLS+RVYL ETTRSMGL Y
Subject: 60 DFLSIRVYLGAETTRSMGLAY 80
Accession: Q06439
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 84 (39.4 bits)
Expect = 2.1e-06
P = 2.1e-06
Identities = 18/21 (85%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYL ETTRSMGL Y
Subject: 60 DFLSVRVYLGGETTRSMGLTY 80
Accession: Q00914
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 83 (38.9 bits)
Expect = 3.0e-06
P = 3.0e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYL E+TRSMGL Y
Subject: 60 DFLSVRVYLGSESTRSMGLSY 80
Accession: P31556
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 83 (38.9 bits)
Expect = 3.0e-06
P = 3.0e-06
Identities = 17/21 (80%)
Positives = 18/21 (85%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYL ET+RSMGL Y
Subject: 60 DFLSVRVYLGSETSRSMGLAY 80
Accession: P11601
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 80 (37.5 bits)
Expect = 8.8e-06
P = 8.8e-06
Identities = 17/21 (80%)
Positives = 17/21 (80%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYL ETTRSM L Y
Subject: 60 DFLSVRVYLGPETTRSMALSY 80
Accession: P10794
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 80
Score = 80 (37.5 bits)
Expect = 8.8e-06
P = 8.8e-06
Identities = 17/21 (80%)
Positives = 17/21 (80%)
Query: 1 DFLSVRVYLWHETTRSMGLGY 21
DFLSVRVYL ETTRSM L Y
Subject: 60 DFLSVRVYLGPETTRSMALSY 80
Accession: P49477
PHOTOSYSTEM I IRON-SULFUR CENTER (PHOTOSYSTEM I SUBUNIT
VII) (9 KD POLYPEPTIDE) (PSI-C).
Length = 81
Score = 44 (20.6 bits)
Expect = 4.8e-05
Sum P(2) = 4.8e-05
Identities = 9/9 (100%)
Positives = 9/9 (100%)
Query: 1 DFLSVRVYL 9
DFLSVRVYL
Subject: 60 DFLSVRVYL 68
Score = 43 (20.2 bits)
Expect = 4.8e-05
Sum P(2) = 4.8e-05
Identities = 8/10 (80%)
Positives = 9/10 (90%)
Query: 12 ETTRSMGLGY 21
ETTRS+GL Y
Subject: 72 ETTRSLGLAY 81
Accession: P38249
HYPOTHETICAL 110.3 KD PROTEIN IN HSP26-SEC18 INTERGENIC
REGION.
Length = 964
Score = 46 (21.6 bits)
Expect = 1.8
P = 0.84
Identities = 8/15 (53%)
Positives = 12/15 (80%)
Query: 3 LSVRVYLWHETTRSM 17
+SV++ LWHE RS+
Subject: 246 VSVKLELWHEAYRSI 260
Accession: Q04786
BETA-HEXOSAMINIDASE (EC 3.2.1.52)
(N-ACETYL-BETA-GLUCOSAMINIDASE) (BETA-N-ACETYLHEXOSAMINIDASE)
(CHITOBIASE).
Length = 847
Score = 45 (21.1 bits)
Expect = 2.5
P = 0.92
Identities = 9/16 (56%)
Positives = 11/16 (68%)
Query: 1 DFLSVRVYLWHETTRS 16
DFL V+ LW ET R+
Subject: 682 DFLGVQGALWSETIRT 697
Accession: Q10515
VERY HYPOTHETICAL 16.1 KD PROTEIN CY427.13.
Length = 156
Score = 44 (20.6 bits)
Expect = 2.9
P = 0.95
Identities = 8/10 (80%)
Positives = 9/10 (90%)
Query: 11 HETTRSMGLG 20
HET R+MGLG
Subject: 127 HETLRAMGLG 136
Accession: P36182
HEAT SHOCK PROTEIN 82 (FRAGMENT).
Length = 499
Score = 43 (20.2 bits)
Expect = 4.7
P = 0.99
Identities = 7/14 (50%)
Positives = 10/14 (71%)
Query: 1 DFLSVRVYLWHETT 14
+F+S +YLW E T
Subject: 1 EFISYPIYLWTEKT 14
Accession: P27323
HEAT SHOCK PROTEIN 81-1 (HSP81-1) (HEAT SHOCK PROTEIN
83).
Length = 700
Score = 43 (20.2 bits)
Expect = 4.8
P = 0.99
Identities = 7/14 (50%)
Positives = 10/14 (71%)
Query: 1 DFLSVRVYLWHETT 14
+F+S +YLW E T
Subject: 200 EFISYPIYLWTEKT 213
Accession: P51819
HEAT SHOCK PROTEIN 83.
Length = 703
Score = 43 (20.2 bits)
Expect = 4.8
P = 0.99
Identities = 7/14 (50%)
Positives = 10/14 (71%)
Query: 1 DFLSVRVYLWHETT 14
+F+S +YLW E T
Subject: 205 EFISYPIYLWTEKT 218
Accession: Q08277
HEAT SHOCK PROTEIN 82.
Length = 715
Score = 43 (20.2 bits)
Expect = 4.8
P = 0.99
Identities = 7/14 (50%)
Positives = 10/14 (71%)
Query: 1 DFLSVRVYLWHETT 14
+F+S +YLW E T
Subject: 211 EFISYPIYLWTEKT 224
Accession: P41957
APOPTOSIS REGULATOR CED-9 (CELL DEATH PROTEIN 9).
Length = 271
Score = 31 (14.5 bits)
Expect = 5.1
Sum P(2) = 0.99
Identities = 5/9 (55%)
Positives = 6/9 (66%)
Query: 4 SVRVYLWHE 12
S R+Y W E
Subject: 67 STRIYDWEE 75
Score = 28 (13.1 bits)
Expect = 5.1
Sum P(2) = 0.99
Identities = 5/8 (62%)
Positives = 6/8 (75%)
Query: 11 HETTRSMG 18
HE RS+G
Subject: 113 HEMMRSLG 120
Accession: P21128
PLACENTAL PROTEIN 11 PRECURSOR (PP11) (EC 3.4.21.-).
Length = 369
Score = 42 (19.7 bits)
Expect = 6.4
P = 1.0
Identities = 8/19 (42%)
Positives = 11/19 (57%)
Query: 3 LSVRVYLWHETTRSMGLGY 21
L+VR Y W ++T G Y
Subject: 341 LAVRTYTWDKSTYGNGKKY 359
Accession: P28754
HYPOTHETICAL 23.6 KD PROTEIN IN SODM 3'REGION (ORFB).
Length = 214
Score = 35 (16.4 bits)
Expect = 7.0
Sum P(2) = 1.0
Identities = 5/9 (55%)
Positives = 7/9 (77%)
Query: 5 VRVYLWHET 13
V +YLW +T
Subject: 38 VNIYLWKQT 46
Score = 22 (10.3 bits)
Expect = 7.0
Sum P(2) = 1.0
Identities = 3/5 (60%)
Positives = 5/5 (100%)
Query: 17 MGLGY 21
+G+GY
Subject: 115 LGVGY 119
Accession: P36183
ENDOPLASMIN HOMOLOG PRECURSOR (GRP94 HOMOLOG).
Length = 809
Score = 33 (15.5 bits)
Expect = 8.3
Sum P(2) = 1.0
Identities = 4/10 (40%)
Positives = 8/10 (80%)
Query: 1 DFLSVRVYLW 10
+F++ +YLW
Subject: 275 EFINFPIYLW 284
Score = 28 (13.1 bits)
Expect = 8.3
Sum P(2) = 1.0
Identities = 5/11 (45%)
Positives = 8/11 (72%)
Query: 10 WHETTRSMGLG 20
W+E +S+ LG
Subject: 512 WNEFGKSVKLG 522
Accession: P35016
ENDOPLASMIN HOMOLOG PRECURSOR (GRP94 HOMOLOG).
Length = 817
Score = 33 (15.5 bits)
Expect = 8.4
Sum P(2) = 1.0
Identities = 4/10 (40%)
Positives = 8/10 (80%)
Query: 1 DFLSVRVYLW 10
+F++ +YLW
Subject: 275 EFINFPIYLW 284
Score = 28 (13.1 bits)
Expect = 8.4
Sum P(2) = 1.0
Identities = 5/11 (45%)
Positives = 8/11 (72%)
Query: 10 WHETTRSMGLG 20
W+E +S+ LG
Subject: 519 WNEFGKSIKLG 529
Accession: P26406
UNDECAPRENYL-PHOSPHATE GALACTOSEPHOSPHOTRANSFERASE (EC
2.7.8.6) (GALACTOSYL-P-P-UNDECAPRENOL SYNTHETASE).
Length = 476
Score = 41 (19.2 bits)
Expect = 9.1
P = 1.0
Identities = 6/12 (50%)
Positives = 9/12 (75%)
Query: 7 VYLWHETTRSMG 18
+YLW++ TR G
Subject: 300 IYLWYKVTRDGG 311
Accession: P17252
PROTEIN KINASE C, ALPHA TYPE (EC 2.7.1.-) (PKC-ALPHA).
Length = 672
Score = 41 (19.2 bits)
Expect = 9.2
P = 1.0
Identities = 8/18 (44%)
Positives = 12/18 (66%)
Query: 3 LSVRVYLWHETTRSMGLG 20
LSV ++ W TTR+ +G
Subject: 240 LSVEIWDWDRTTRNDFMG 257
Accession: P20444
PROTEIN KINASE C, ALPHA TYPE (EC 2.7.1.-) (PKC-ALPHA).
Length = 672
Score = 41 (19.2 bits)
Expect = 9.2
P = 1.0
Identities = 8/18 (44%)
Positives = 12/18 (66%)
Query: 3 LSVRVYLWHETTRSMGLG 20
LSV ++ W TTR+ +G
Subject: 240 LSVEIWDWDRTTRNDFMG 257
Accession: P10102
PROTEIN KINASE C, ALPHA TYPE (EC 2.7.1.-) (PKC-ALPHA).
Length = 672
Score = 41 (19.2 bits)
Expect = 9.2
P = 1.0
Identities = 8/18 (44%)
Positives = 12/18 (66%)
Query: 3 LSVRVYLWHETTRSMGLG 20
LSV ++ W TTR+ +G
Subject: 240 LSVEIWDWDRTTRNDFMG 257
Accession: P05696
PROTEIN KINASE C, ALPHA TYPE (EC 2.7.1.-) (PKC-ALPHA).
Length = 672
Score = 41 (19.2 bits)
Expect = 9.2
P = 1.0
Identities = 8/18 (44%)
Positives = 12/18 (66%)
Query: 3 LSVRVYLWHETTRSMGLG 20
LSV ++ W TTR+ +G
Subject: 240 LSVEIWDWDRTTRNDFMG 257
Parameters:
B=50
H=1
V=500
-ctxfactor=1.00
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.460 same same same
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 21 21 10. 41 3 11 22 0.17 22
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 45 (21.1 bits) 115 (53.9 bits) 42 42
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 664 720134 122151 577995 19988 12
Database: sp.prot
Release date: unknown
Posted date: 11:35 PM CDT Aug 21, 1997
# of letters in database: 21,210,388
# of sequences in database: 59,021
# of database sequences satisfying E: 37
No. of states in DFA: 273 (27 KB)
Total size of DFA: 35 KB (64 KB)
Time to generate neighborhood: 0.01u 0.03s 0.04t Real: 00:00:00
Time to search database: 2.19u 0.42s 2.61t Real: 00:00:08
Total cpu time: 2.22u 0.68s 2.90t Real: 00:00:08