Biology WorkBench

Version 2.0

BLASTP Results

Compares an amino acid query sequence against a protein sequence.

Algorithm Citation:
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10.
Program Citation:
National Center for Biotechnology Information,Bldg 38A, NIH,8600 Rockville Pike,Bethesda, MD 20894

PBG Deaminase (Arabidopsis)

Query=  S50762MDIASSSLSQAHKVVLTRQPSSRVNTCSLGSVSAIGFSLPQISS©ÄZ$r@
        (322 letters)
Database:  sp.prot
           59,021 sequences; 21,210,388 total letters.
Check Sequences and then Press 'Import to Workbench' to Import them to the Workbench

     Observed Numbers of Database Sequences Satisfying
    Various EXPECTation Thresholds (E parameter values)
        Histogram units:      = 25 Sequences     : less than 25 sequences
 EXPECTation Threshold
 (E parameter)
    |
    V   Observed Counts-->
  10000 4957 1284 |===================================================
   6310 3673 1473 |==========================================================
   3980 2200  606 |========================
   2510 1594  598 |=======================
   1580  996  299 |===========
   1000  697  272 |==========
    631  425  112 |====
    398  313   97 |===
    251  216   62 |==
    158  154   32 |=
    100  122   34 |=
   63.1   88   25 |=
   39.8   63    8 |:
   25.1   55    6 |:
   15.8   49   19 |:
 >>>>>>>>>>>>>>>>>>>>>  Expect = 10.0, Observed = 30  <<<<<<<<<<<<<<<<<
   10.0   30    4 |:
   6.31   26    7 |:
   3.98   19    3 |:
   2.51   16    0 |
   1.58   16    1 |:
   1.00   15    1 |:
   0.63   14    1 |:
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N


Accession: P06983
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE).
            
Length = 313
Score = 262 (120.0 bits)
Expect = 1.1e-85
Sum P(4) = 1.1e-85

Identities = 52/104 (50%)
Positives = 68/104 (65%)
Query:   161 NFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACR 220
             + RGNV TRLSKL  G+  A +LA+AGLKRL +   + + L  +  LPAV QGA+GI CR
Subject: 147 SLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECR 206

Query:   221 TDDDKMATYLASLNHEETRLAISCERAFLETLDGSCRTPIAGYA 264
              DD +    LA+LNH ET L ++ ERA    L+G+C+ PI  YA
Subject: 207 LDDSRTRELLAALNHHETALRVTAERAMNTRLEGACQVPIGSYA 250

Score = 254 (116.3 bits)
Expect = 1.1e-85
Sum P(4) = 1.1e-85

Identities = 54/101 (53%)
Positives = 66/101 (65%)
Query:    56 TTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPRE 115
             T GD IL  PLA +GGKGLF KE++ AL+    DIAVHSMKDVP   P+   L     RE
Subject:  43 TRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE 102

Query:   116 DVRDAFICLTAATLAELPAGSVVGTASLRRKSQILHKYPAL 156
             D RDAF+     +L  LPAGS+VGT+SLRR+ Q+  + P L
Subject: 103 DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDL 143

Score = 83 (38.0 bits)
Expect = 1.1e-85
Sum P(4) = 1.1e-85

Identities = 17/31 (54%)
Positives = 22/31 (70%)
Query:    14 IIRIGTRGSPLALAQAYETREKLKKKHPELV 44
             ++RI TR SPLAL QA+  ++KL   HP LV
Subject:   5 VLRIATRQSPLALWQAHYVKDKLMASHPGLV 35

Score = 61 (27.9 bits)
Expect = 1.1e-85
Sum P(4) = 1.1e-85

Identities = 10/25 (40%)
Positives = 17/25 (68%)
Query:   269 EGNCIFRGLVASPDGTKVLETSRKG 293
             +G    RGLV +PDG++++   R+G
Subject: 254 DGEIWLRGLVGAPDGSQIIRGERRG 278

Accession: P16616
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE).
            
Length = 314
Score = 275 (126.0 bits)
Expect = 9.4e-76
Sum P(4) = 9.4e-76

Identities = 57/122 (46%)
Positives = 81/122 (66%)
Query:    38 KKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKD 97
             +K  E+    A  I+ I T GD+I+   L+ +GGKGLF KEI++AL+N  ID+AVHSMKD
Subject:  24 QKLKEINPSFAFEIKEIVTKGDRIVDVTLSKVGGKGLFVKEIEQALLNEEIDMAVHSMKD 83

Query:    98 VPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVGTASLRRKSQILHKYPALH 157
             +P  LPE  ++ C   RED RDA I      L+E+  G+V+GT+SLRR +Q+L + P L 
Subject:  84 MPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKKGAVIGTSSLRRSAQLLIERPDLT 143

Query:   158 VE 159
             ++
Subject: 144 IK 145

Score = 183 (83.8 bits)
Expect = 9.4e-76
Sum P(4) = 9.4e-76

Identities = 36/97 (37%)
Positives = 53/97 (54%)
Query:   197 VASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 256
             V   L  +  LPAV QGA+ I CR  D+++    +    E T+  +  ERAFL  ++G C
Subject: 183 VTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEGGC 242

Query:   257 RTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKG 293
             + PIAGY+  + +      GLVASPDG  + + +  G
Subject: 243 QVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTG 279

Score = 78 (35.7 bits)
Expect = 9.4e-76
Sum P(4) = 9.4e-76

Identities = 16/37 (43%)
Positives = 23/37 (62%)
Query:   163 RGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVAS 199
             RGN+ TRL KL+     A +LA AGL R+   ++V +
Subject: 148 RGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQDVVT 184

Score = 51 (23.4 bits)
Expect = 9.4e-76
Sum P(4) = 9.4e-76

Identities = 11/27 (40%)
Positives = 18/27 (66%)
Query:    15 IRIGTRGSPLALAQAYETREKLKKKHP 41
             I++G+R S LA+ Q     +KLK+ +P
Subject:   5 IKVGSRRSKLAMTQTKWVIQKLKEINP 31

Accession: P13446
PORPHOBILINOGEN DEAMINASE PRECURSOR (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE).
            
Length = 480
Score = 186 (85.2 bits)
Expect = 2.3e-60
Sum P(5) = 2.3e-60

Identities = 39/84 (46%)
Positives = 50/84 (59%)
Query:    49 IHIEIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTIL 108
             + ++ + T GDKIL  PLA +GGKGLF KE++ AL+    DIAVHS KDVP  LPE  +L
Subject: 182 VELQPMSTRGDKILDSPLAKVGGKGLFVKELETALLENRSDIAVHSTKDVPMELPEGLVL 241

Query:   109 PCNLPREDVRDAFICLTAATLAEL 132
                  R D  DA +    + L  L
Subject: 242 GVICKRHDPCDAIVFPKGSNLKSL 265

Score = 137 (62.8 bits)
Expect = 2.3e-60
Sum P(5) = 2.3e-60

Identities = 26/66 (39%)
Positives = 41/66 (62%)
Query:   199 SILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSCRT 258
             +I+  + M PA  QGA+ I  RT+D ++A  L  L+H    + ++CERA    L+G C+ 
Subject: 338 NIIDPNVMCPAAGQGALSIELRTNDPEIAALLEPLHHIPDAVTVACERAMNRRLNGGCQV 397

Query:   259 PIAGYA 264
             PI+G+A
Subject: 398 PISGFA 403

Score = 96 (44.0 bits)
Expect = 2.3e-60
Sum P(5) = 2.3e-60

Identities = 20/35 (57%)
Positives = 24/35 (68%)
Query:   163 RGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENV 197
             RGNV TRL+KL  G   A +LA AGLKRL  ++ V
Subject: 298 RGNVNTRLAKLDSGDYDAIILAAAGLKRLGFSDRV 332

Score = 73 (33.4 bits)
Expect = 2.3e-60
Sum P(5) = 2.3e-60

Identities = 16/29 (55%)
Positives = 22/29 (75%)
Query:   128 TLAELPAGSVVGTASLRRKSQILHKYPAL 156
             +L +LP G+ VGT+SLRR+ Q+L K P L
Subject: 264 SLEDLPHGARVGTSSLRRQCQLLLKRPDL 292

Score = 52 (23.8 bits)
Expect = 2.3e-60
Sum P(5) = 2.3e-60

Identities = 11/27 (40%)
Positives = 18/27 (66%)
Query:    15 IRIGTRGSPLALAQAYETREKLKKKHP 41
             +R+ TR SPLA+ QA   + +L++  P
Subject: 152 VRVATRKSPLAMWQAEFIQSELERLWP 178

Accession: P08397
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE).
            
Length = 361
Score = 158 (72.4 bits)
Expect = 6.3e-56
Sum P(5) = 6.3e-56

Identities = 32/69 (46%)
Positives = 43/69 (62%)
Query:    54 IKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLP 113
             + TTGDKIL   L+ IG K LFTKE++ AL    +D+ VHS+KD+PT LP    +     
Subject:  56 MSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICK 115

Query:   114 REDVRDAFI 122
             RE+  DA +
Subject: 116 RENPHDAVV 124

Score = 149 (68.2 bits)
Expect = 6.3e-56
Sum P(5) = 6.3e-56

Identities = 33/82 (40%)
Positives = 45/82 (54%)
Query:   180 ATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETR 239
             A +LA AGL+R+     V  IL  +E + AV QGA+G+  R  D  +   +  L+  ET 
Subject: 185 AIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETL 244

Query:   240 LAISCERAFLETLDGSCRTPIA 261
             L    ERAFL  L+G C  P+A
Subject: 245 LRCIAERAFLRHLEGGCSVPVA 266

Score = 79 (36.2 bits)
Expect = 6.3e-56
Sum P(5) = 6.3e-56

Identities = 17/29 (58%)
Positives = 21/29 (72%)
Query:   128 TLAELPAGSVVGTASLRRKSQILHKYPAL 156
             TL  LP  SVVGT+SLRR +Q+  K+P L
Subject: 133 TLETLPEKSVVGTSSLRRAAQLQRKFPHL 161

Score = 63 (28.9 bits)
Expect = 6.3e-56
Sum P(5) = 6.3e-56

Identities = 16/42 (38%)
Positives = 20/42 (47%)
Query:     2 ACVAVEQKTRTAIIRIGTRGSPLALAQAYETREKLKKKHPEL 43
             A  A E   +  +IR+GTR S LA  Q       LK  +P L
Subject:   8 AATAEENSPKMRVIRVGTRKSQLARIQTDSVVATLKASYPGL 49

Score = 41 (18.8 bits)
Expect = 6.3e-56
Sum P(5) = 6.3e-56

Identities = 8/13 (61%)
Positives = 10/13 (76%)
Query:   161 NFRGNVQTRLSKL 173
             + RGN+ TRL KL
Subject: 165 SIRGNLNTRLRKL 177

Score = 34 (15.6 bits)
Expect = 4.6e-12
Sum P(2) = 4.6e-12

Identities = 8/21 (38%)
Positives = 14/21 (66%)
Query:   164 GNVQTRLSKLQGGKVQATLLA 184
             G  +++L+++Q   V ATL A
Subject:  24 GTRKSQLARIQTDSVVATLKA 44

Accession: P22907
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE).
            
Length = 361
Score = 152 (69.6 bits)
Expect = 9.7e-53
Sum P(5) = 9.7e-53

Identities = 31/69 (44%)
Positives = 43/69 (62%)
Query:    54 IKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLP 113
             + TTGDKI+   L+ IG K LFTKE++ AL    +D+ VHS+KDVPT LP    +     
Subject:  56 MSTTGDKIVDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICK 115

Query:   114 REDVRDAFI 122
             R++  DA +
Subject: 116 RQNPCDAVV 124

Score = 146 (66.9 bits)
Expect = 9.7e-53
Sum P(5) = 9.7e-53

Identities = 32/82 (39%)
Positives = 46/82 (56%)
Query:   180 ATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETR 239
             A +LA+AGL+R+     V  IL  +E + AV QGA+ +  R  D  +   ++ L+  ET 
Subject: 185 AIVLAVAGLQRMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETL 244

Query:   240 LAISCERAFLETLDGSCRTPIA 261
             L    ERAFL  L+G C  P+A
Subject: 245 LRCIAERAFLRHLEGGCSVPVA 266

Score = 74 (33.9 bits)
Expect = 9.7e-53
Sum P(5) = 9.7e-53

Identities = 16/29 (55%)
Positives = 20/29 (68%)
Query:   128 TLAELPAGSVVGTASLRRKSQILHKYPAL 156
             TL  LP  S VGT+SLRR +Q+  K+P L
Subject: 133 TLETLPEKSAVGTSSLRRVAQLQRKFPNL 161

Score = 58 (26.6 bits)
Expect = 9.7e-53
Sum P(5) = 9.7e-53

Identities = 15/40 (37%)
Positives = 20/40 (50%)
Query:     2 ACVAVEQKTRTAIIRIGTRGSPLALAQAYETREKLKKKHP 41
             A  A E  ++  +IR+GTR S LA  Q       LK  +P
Subject:   8 ATTAEENGSKMRVIRVGTRKSQLARIQTETVVAMLKALYP 47

Score = 42 (19.2 bits)
Expect = 9.7e-53
Sum P(5) = 9.7e-53

Identities = 8/14 (57%)
Positives = 11/14 (78%)
Query:   160 ENFRGNVQTRLSKL 173
             ++ RGN+ TRL KL
Subject: 164 KSIRGNLNTRLRKL 177

Accession: P46355
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE) (FRAGMENT).
            
Length = 183
Score = 268 (122.8 bits)
Expect = 3.5e-52
Sum P(3) = 3.5e-52

Identities = 58/105 (55%)
Positives = 71/105 (67%)
Query:    56 TTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPRE 115
             T GD IL  PLA +GGKGLF KE++ AL++G  DIAVHSMKDVP   PE   L     RE
Subject:  43 TRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERE 102

Query:   116 DVRDAFICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEE 160
             D RDAF+    A L +LPAGSVVGT+SLRR+ Q+  + P L + +
Subject: 103 DPRDAFVSSHYAHLDDLPAGSVVGTSSLRRQCQLRERRPDLIIRD 147

Score = 97 (44.4 bits)
Expect = 3.5e-52
Sum P(3) = 3.5e-52

Identities = 20/33 (60%)
Positives = 25/33 (75%)
Query:   161 NFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 193
             + RGNV TRL+KL  G  QA +LA+AGLKRL +
Subject: 147 DLRGNVGTRLAKLDNGDYQAIILAVAGLKRLGL 179

Score = 74 (33.9 bits)
Expect = 3.5e-52
Sum P(3) = 3.5e-52

Identities = 17/30 (56%)
Positives = 20/30 (66%)
Query:    14 IIRIGTRGSPLALAQAYETREKLKKKHPEL 43
             IIRI TR SPLAL QA+  +  L+  HP L
Subject:   5 IIRIATRQSPLALWQAHYVQHLLQANHPGL 34

Accession: P28789
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE).
            
Length = 327
Score = 136 (62.3 bits)
Expect = 3.3e-49
Sum P(6) = 3.3e-49

Identities = 32/91 (35%)
Positives = 43/91 (47%)
Query:   179 QATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEET 238
             Q  +LA AGL R+ +   +      D M  AV QGA+GI  R  D KM   L  +     
Subject: 174 QCIILASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNA 233

Query:   239 RLAISCERAFLETLDGSCRTPIAGYASKDEE 269
              +    ERA + TL+G C  PI   +  +EE
Subject: 234 TICCLSERALMRTLEGGCSVPIGVESKYNEE 264

Score = 84 (38.5 bits)
Expect = 3.3e-49
Sum P(6) = 3.3e-49

Identities = 16/32 (50%)
Positives = 23/32 (71%)
Query:   128 TLAELPAGSVVGTASLRRKSQILHKYPALHVE 159
             +L +LP G +VGT+S+RR +Q+  KYP L  E
Subject: 122 SLDDLPDGGIVGTSSVRRSAQLKRKYPHLKFE 153

Score = 75 (34.4 bits)
Expect = 3.3e-49
Sum P(6) = 3.3e-49

Identities = 14/30 (46%)
Positives = 22/30 (73%)
Query:    54 IKTTGDKILSQPLADIGGKGLFTKEIDEAL 83
             ++T GD+I  +PL   GGK L+TKE+++ L
Subject:  41 LQTLGDQIQFKPLYSFGGKALWTKELEDHL 70

Score = 68 (31.1 bits)
Expect = 3.3e-49
Sum P(6) = 3.3e-49

Identities = 15/35 (42%)
Positives = 20/35 (57%)
Query:    88 IDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFI 122
             +D+ VHS+KD+PT LPE   L     R D  D  +
Subject:  79 LDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLV 113

Score = 58 (26.6 bits)
Expect = 3.3e-49
Sum P(6) = 3.3e-49

Identities = 14/34 (41%)
Positives = 18/34 (52%)
Query:   160 ENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSM 193
             E+ RGN+QTRL KL   K     + LA    + M
Subject: 153 ESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRM 186

Score = 45 (20.6 bits)
Expect = 3.3e-49
Sum P(6) = 3.3e-49

Identities = 9/28 (32%)
Positives = 18/28 (64%)
Query:    15 IRIGTRGSPLALAQAYETREKLKKKHPE 42
             + IG R S LA+ Q+    + +++K+P+
Subject:   6 LHIGGRKSKLAVIQSNHVLKLIEEKYPD 33

Accession: P19356
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8), ERYTHROCYTE
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE).
            
Length = 344
Score = 158 (72.4 bits)
Expect = 7.5e-48
Sum P(5) = 7.5e-48

Identities = 33/69 (47%)
Positives = 43/69 (62%)
Query:    54 IKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLP 113
             + TTGDKIL   L+ IG K LFTKE++ AL    +D+ VHS+KDVPT LP    +     
Subject:  39 MSTTGDKILDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIGAICK 98

Query:   114 REDVRDAFI 122
             RE+  DA +
Subject:  99 RENPCDAVV 107

Score = 140 (64.1 bits)
Expect = 7.5e-48
Sum P(5) = 7.5e-48

Identities = 31/82 (37%)
Positives = 44/82 (53%)
Query:   180 ATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETR 239
             A +LA+AGL+R+     V  IL  +E + AV QGA+ +  R  D  +   +  L+  ET 
Subject: 168 AIILAVAGLQRMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETL 227

Query:   240 LAISCERAFLETLDGSCRTPIA 261
             L    ER FL  L+G C  P+A
Subject: 228 LRCIAERDFLRHLEGGCSVPVA 249

Score = 74 (33.9 bits)
Expect = 7.5e-48
Sum P(5) = 7.5e-48

Identities = 16/29 (55%)
Positives = 20/29 (68%)
Query:   128 TLAELPAGSVVGTASLRRKSQILHKYPAL 156
             TL  LP  S VGT+SLRR +Q+  K+P L
Subject: 116 TLETLPEKSAVGTSSLRRVAQLQRKFPHL 144

Score = 48 (22.0 bits)
Expect = 7.5e-48
Sum P(5) = 7.5e-48

Identities = 12/28 (42%)
Positives = 15/28 (53%)
Query:    14 IIRIGTRGSPLALAQAYETREKLKKKHP 41
             +IR+GTR S LA  Q       LK  +P
Subject:   3 VIRVGTRKSQLARIQTDTVVAMLKTLYP 30

Score = 42 (19.2 bits)
Expect = 7.5e-48
Sum P(5) = 7.5e-48

Identities = 8/14 (57%)
Positives = 11/14 (78%)
Query:   160 ENFRGNVQTRLSKL 173
             ++ RGN+ TRL KL
Subject: 147 KSIRGNLNTRLRKL 160

Accession: P30527
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE) (FRAGMENT).
            
Length = 183
Score = 250 (114.5 bits)
Expect = 1.2e-47
Sum P(3) = 1.2e-47

Identities = 53/105 (50%)
Positives = 69/105 (65%)
Query:    56 TTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPRE 115
             T GD IL  PLA +GGKGLF KE++ AL++G  DIAVHSMKDVP   PE   L      +
Subject:  43 TRGDIILDTPLAKVGGKGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEPD 102

Query:   116 DVRDAFICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEE 160
             D RDAF+    A + +LPAGS+VG +SLRR+ Q+  + P L + +
Subject: 103 DPRDAFVSPHFAHIDDLPAGSIVGNSSLRRQCQLRERRPDLIIRD 147

Score = 90 (41.2 bits)
Expect = 1.2e-47
Sum P(3) = 1.2e-47

Identities = 18/37 (48%)
Positives = 24/37 (64%)
Query:   161 NFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENV 197
             + RGNV TRL+KL  G   A +LA+AGL RL +   +
Subject: 147 DLRGNVGTRLAKLDNGDYHAIILAVAGLNRLGLASRI 183

Score = 74 (33.9 bits)
Expect = 1.2e-47
Sum P(3) = 1.2e-47

Identities = 17/30 (56%)
Positives = 20/30 (66%)
Query:    14 IIRIGTRGSPLALAQAYETREKLKKKHPEL 43
             IIRI TR SPLAL QA+  +  L+  HP L
Subject:   5 IIRIATRQSPLALWQAHYVQHLLQANHPGL 34

Accession: Q11173
PROBABLE PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE) (FRAGMENT).
            
Length = 155
Score = 167 (76.5 bits)
Expect = 1.6e-26
Sum P(3) = 1.6e-26

Identities = 36/79 (45%)
Positives = 48/79 (60%)
Query:    71 GKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLA 130
             G G+FT  + EA+  G +D AVHS KD+PT    +  +    PR D RDA +     TL 
Subject:  50 GVGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLG 109

Query:   131 ELPAGSVVGTASLRRKSQI 149
             ELP GS+VGT+S RR +Q+
Subject: 110 ELPVGSLVGTSSPRRAAQL 128

Score = 60 (27.5 bits)
Expect = 1.6e-26
Sum P(3) = 1.6e-26

Identities = 14/23 (60%)
Positives = 16/23 (69%)
Query:    14 IIRIGTRGSPLALAQAYETREKL 36
             +IRIGTRGS LA  QA   R+ L
Subject:   1 MIRIGTRGSLLATTQAATVRDAL 23

Score = 45 (20.6 bits)
Expect = 1.6e-26
Sum P(3) = 1.6e-26

Identities = 8/14 (57%)
Positives = 11/14 (78%)
Query:   163 RGNVQTRLSKLQGG 176
             RGN+ TRL+K+  G
Subject: 141 RGNLDTRLNKVSSG 154

Accession: P40129
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE) (FRAGMENT).
            
Length = 89
Score = 139 (63.7 bits)
Expect = 3.1e-20
Sum P(2) = 3.1e-20

Identities = 27/44 (61%)
Positives = 32/44 (72%)
Query:    56 TTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVP 99
             T G  +L  PLA +GGKGLF KE++ AL+    DIAVHSMKDVP
Subject:  43 TRGXLLLDTPLAKVGGKGLFVKELELALLENRADIAVHSMKDVP 86

Score = 74 (33.9 bits)
Expect = 3.1e-20
Sum P(2) = 3.1e-20

Identities = 16/30 (53%)
Positives = 22/30 (73%)
Query:    14 IIRIGTRGSPLALAQAYETREKLKKKHPEL 43
             I+RI TR SPLAL QA+  +++L+  HP L
Subject:   5 ILRIATRQSPLALWQAHFVQQRLEACHPGL 34

Accession: Q09899
PUTATIVE PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE) (FRAGMENT).
            
Length = 125
Score = 92 (42.1 bits)
Expect = 3.4e-10
Sum P(2) = 3.4e-10

Identities = 17/51 (33%)
Positives = 30/51 (58%)
Query:    72 KGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFI 122
             K L+T+E++  L+     I VHS+KD+P+ +P+  ++ C   R    DA +
Subject:  63 KSLWTRELEALLVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIV 113

Score = 62 (28.4 bits)
Expect = 3.4e-10
Sum P(2) = 3.4e-10

Identities = 14/27 (51%)
Positives = 19/27 (70%)
Query:    17 IGTRGSPLALAQAYETREKLKKKHPEL 43
             IGTR S LA+ Q+   RE+L+K +P L
Subject:   9 IGTRKSKLAVIQSEIIREELEKHYPHL 35

Accession: P28464
PORPHOBILINOGEN DEAMINASE (EC 4.3.1.8) (PBG)
            (HYDROXYMETHYLBILANE SYNTHASE) (HMBS) (PRE-UROPORPHYRINOGEN
            SYNTHASE) (FRAGMENT).
            
Length = 43
Score = 114 (52.2 bits)
Expect = 5.8e-09
P = 5.8e-09

Identities = 21/41 (51%)
Positives = 31/41 (75%)
Query:    49 IHIEIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGHID 89
             I ++++KTTGD +L  PL+ IG  GLFTK+I++ L+ G ID
Subject:   3 ISLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKHLLAGEID 43

Accession: P08104
SODIUM CHANNEL PROTEIN, BRAIN III ALPHA SUBUNIT.
            
Length = 1951
Score = 68 (31.1 bits)
Expect = 0.62
P = 0.46

Identities = 13/33 (39%)
Positives = 20/33 (60%)
Query:   271 NCIFRGLVASPDGTKVLETSRKGPYVYEDMVKM 303
             NC+F  L   PD TK +E +  G Y +E ++K+
Subject: 141 NCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKI 173

Accession: P02155
MYOGLOBIN.
            
Length = 153
Score = 66 (30.2 bits)
Expect = 0.77
P = 0.54

Identities = 13/34 (38%)
Positives = 21/34 (61%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ EL+ D  +H+   K  GD
Subject:  89 LAQSHATKHKIPVKYLELISDAIVHVLQKKHPGD 122

Accession: P04775
SODIUM CHANNEL PROTEIN, BRAIN II ALPHA SUBUNIT.
            
Length = 2005
Score = 66 (30.2 bits)
Expect = 1.2
P = 0.69

Identities = 12/33 (36%)
Positives = 20/33 (60%)
Query:   271 NCIFRGLVASPDGTKVLETSRKGPYVYEDMVKM 303
             NC+F  +   PD TK +E +  G Y +E ++K+
Subject: 142 NCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKI 174

Accession: P02151
MYOGLOBIN.
            
Length = 153
Score = 62 (28.4 bits)
Expect = 2.9
P = 0.94

Identities = 12/34 (35%)
Positives = 20/34 (58%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + D  +H+   K  GD
Subject:  89 LAQSHATKHKIPVKYLEFISDAIVHVLQKKHPGD 122

Accession: P02152
MYOGLOBIN.
            
Length = 153
Score = 62 (28.4 bits)
Expect = 2.9
P = 0.94

Identities = 12/34 (35%)
Positives = 20/34 (58%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + D  +H+   K  GD
Subject:  89 LAQSHATKHKIPVKYLEFISDAIVHVLQKKHPGD 122

Accession: P02153
MYOGLOBIN.
            
Length = 153
Score = 62 (28.4 bits)
Expect = 2.9
P = 0.94

Identities = 12/34 (35%)
Positives = 20/34 (58%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + D  +H+   K  GD
Subject:  89 LAQSHATKHKIPVKYLEFISDAIVHVLQKKHPGD 122

Accession: P02177
MYOGLOBIN.
            
Length = 153
Score = 61 (27.9 bits)
Expect = 4.0
P = 0.98

Identities = 17/54 (31%)
Positives = 26/54 (48%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGLFTKEI 79
             LAQ++ T+ K+  K+ E + D  IH+   +  GD       A      LF K+I
Subject:  89 LAQSHATKHKIPIKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDI 142

Accession: P02168
MYOGLOBIN.
            
Length = 153
Score = 61 (27.9 bits)
Expect = 4.0
P = 0.98

Identities = 12/34 (35%)
Positives = 21/34 (61%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + +  IH+   K +GD
Subject:  89 LAQSHATKHKIPVKYLEFISEAIIHVLQNKHSGD 122

Accession: P04774
SODIUM CHANNEL PROTEIN, BRAIN I ALPHA SUBUNIT.
            
Length = 2009
Score = 66 (30.2 bits)
Expect = 4.1
Sum P(2) = 0.98

Identities = 12/33 (36%)
Positives = 20/33 (60%)
Query:   271 NCIFRGLVASPDGTKVLETSRKGPYVYEDMVKM 303
             NC+F  +   PD TK +E +  G Y +E ++K+
Subject: 141 NCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKI 173

Score = 36 (16.5 bits)
Expect = 4.1
Sum P(2) = 0.98

Identities = 9/25 (36%)
Positives = 12/25 (48%)
Query:   297 YEDMVKMGKDAGQELLSRAGPGFFG 321
             Y  M K+G    Q+ + R G  F G
Subject:1508 YNAMKKLGSKKPQKPIPRPGNKFQG 1532

Accession: P30997
ALPHA N-CATENIN (NEURAL ALPHA-CATENIN).
            
Length = 906
Score = 62 (28.4 bits)
Expect = 4.1
P = 0.98

Identities = 20/88 (22%)
Positives = 36/88 (40%)
Query:   174 QGGKVQATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASL 233
             +G  V+A    L+ + RL +  ++A ++ L   L  V +    +   T++  +A      
Subject: 120 RGTMVRAARALLSAVTRLLILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEF 179

Query:   234 NHEETRLAISCERAFLETLDGSCRTPIA 261
               E  +L     R   E  D  CR  +A
Subject: 180 GKEMVKLNYVAARRQQELKDPHCRDEMA 207

Accession: P27630
PARA-AMINOBENZOATE SYNTHASE COMPONENT I (EC 4.1.3.-) (ADC
            SYNTHASE).
            
Length = 475
Score = 53 (24.3 bits)
Expect = 5.1
Sum P(3) = 0.99

Identities = 16/43 (37%)
Positives = 20/43 (46%)
Query:   220 RTDDDKMATYLASLNHEETRLAISCERAFLETLDGSCRTPIAG 262
             R  D   A Y+A L+ +E  L  S ER  L+        PIAG
Subject: 240 RLRDANPAPYMAYLDIDEGLLVASPERIILDEASDLDTRPIAG 282

Score = 40 (18.3 bits)
Expect = 5.1
Sum P(3) = 0.99

Identities = 8/19 (42%)
Positives = 10/19 (52%)
Query:   259 PIAGYASKDEEGNCIFRGL 277
             P   Y    E+GN + RGL
Subject: 443 PDGEYRESFEKGNALIRGL 461

Score = 34 (15.6 bits)
Expect = 5.1
Sum P(3) = 0.99

Identities = 8/20 (40%)
Positives = 12/20 (60%)
Query:    46 DGAIHIEIIKTTGDKILSQP 65
             D A  +E I+  GD+ L+ P
Subject: 118 DIARRLEAIRDLGDRELAGP 137

Accession: P02166
MYOGLOBIN.
            
Length = 153
Score = 60 (27.5 bits)
Expect = 5.6
P = 1.0

Identities = 12/34 (35%)
Positives = 20/34 (58%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + +  IH+   K  GD
Subject:  89 LAQSHATKHKIPVKYLEFISEAIIHVLQSKHPGD 122

Accession: P02170
MYOGLOBIN.
            
Length = 153
Score = 60 (27.5 bits)
Expect = 5.6
P = 1.0

Identities = 12/34 (35%)
Positives = 20/34 (58%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + +  IH+   K  GD
Subject:  89 LAQSHATKHKIPVKYLEFISEAIIHVLHSKHPGD 122

Accession: P02154
MYOGLOBIN.
            
Length = 153
Score = 59 (27.0 bits)
Expect = 7.7
P = 1.0

Identities = 13/34 (38%)
Positives = 19/34 (55%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + D  IH    K  GD
Subject:  89 LAQSHATKHKIPVKYLEFISDAIIHALQKKHPGD 122

Accession: P02161
MYOGLOBIN.
            
Length = 153
Score = 59 (27.0 bits)
Expect = 7.7
P = 1.0

Identities = 12/34 (35%)
Positives = 20/34 (58%)
Query:    26 LAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 59
             LAQ++ T+ K+  K+ E + +  IH+   K  GD
Subject:  89 LAQSHATKHKIPIKYLEFISEAIIHVLQSKHPGD 122

Accession: P14682
UBIQUITIN-CONJUGATING ENZYME E2-34 KD (EC 6.3.2.19)
            (UBIQUITIN-PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (CELL
            DIVISION CONTROL PROTEIN 34).
            
Length = 295
Score = 56 (25.6 bits)
Expect = 7.9
Sum P(2) = 1.0

Identities = 10/29 (34%)
Positives = 17/29 (58%)
Query:    40 HPELVEDGAIHIEIIKTTGDKILSQPLAD 68
             HP +  DG + I I+  +GD +  +P A+
Subject:  85 HPNVYRDGRLCISILHQSGDPMTDEPDAE 113

Score = 37 (16.9 bits)
Expect = 7.9
Sum P(2) = 1.0

Identities = 9/26 (34%)
Positives = 11/26 (42%)
Query:   278 VASPDGTKVLETSRKGPYVYEDMVKM 303
             + SP         RK P  Y+  VKM
Subject: 137 INSPANVDAAVDYRKNPEQYKQRVKM 162

Accession: P15390
SODIUM CHANNEL PROTEIN, SKELETAL MUSCLE ALPHA-SUBUNIT
            (MU-1).
            
Length = 1840
Score = 60 (27.5 bits)
Expect = 8.1
P = 1.0

Identities = 11/33 (33%)
Positives = 19/33 (57%)
Query:   271 NCIFRGLVASPDGTKVLETSRKGPYVYEDMVKM 303
             NC+F  +   P  +K +E +  G Y +E ++KM
Subject: 144 NCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKM 176

Parameters:
  B=50
  H=1
  V=500
  -ctxfactor=1.00
  E=10
  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.378    same    same    same
  Query
  Frame  MatID  Length  Eff.Length   E    S W   T  X     E2  S2
   +0      0      322       322      10. 60 3  11 22    0.20 34
Statistics:
  Query          Expected         Observed           HSPs       HSPs
  Frame  MatID  High Score       High Score       Reportable  Reported
   +0      0    64 (29.3 bits)  275 (126.0 bits)       70         70
  Query         Neighborhd  Word      Excluded    Failed   Successful  Overlaps
  Frame  MatID   Words      Hits        Hits    Extensions Extensions  Excluded
   +0      0      5972    13023279     2559997    10446234    17048         7
  Database:  sp.prot
    Release date:  unknown
    Posted date:  11:35 PM CDT Aug 21, 1997
  # of letters in database:  21,210,388
  # of sequences in database:  59,021
  # of database sequences satisfying E:  30
  No. of states in DFA:  539 (53 KB)
  Total size of DFA:  117 KB (128 KB)
  Time to generate neighborhood:  0.02u 0.02s 0.04t  Real: 00:00:00
  Time to search database:  22.41u 0.46s 22.87t  Real: 00:00:26
  Total cpu time:  22.45u 0.61s 23.06t  Real: 00:00:26

sp|P06983|HEM3_ECOLI_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___262__1.1e-85___4
sp|P16616|HEM3_BACSU_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___275__9.4e-76___4
sp|P13446|HEM3_EUGGR_PORPHOBILINOGEN_DEAMINASE_PRECURSOR_...___186__2.3e-60___5
sp|P08397|HEM3_HUMAN_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___158__6.3e-56___5
sp|P22907|HEM3_MOUSE_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___152__9.7e-53___5
sp|P46355|HEM3_YERPE_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___268__3.5e-52___3
sp|P28789|HEM3_YEAST_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___136__3.3e-49___6
sp|P19356|HEM3_RAT___PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___158__7.5e-48___5
sp|P30527|HEM3_YERIN_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___250__1.2e-47___3
sp|Q11173|HEM3_MYCTU_PROBABLE_PORPHOBILINOGEN_DEAMINASE_(...___167__1.6e-26___3
sp|P40129|HEM3_ERWCH_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___139__3.1e-20___2
sp|Q09899|HEM3_SCHPO_PUTATIVE_PORPHOBILINOGEN_DEAMINASE_(...____92__3.4e-10___2
sp|P28464|HEM3_CHLVI_PORPHOBILINOGEN_DEAMINASE_(EC_4.3.1....___114__5.8e-09___1
sp|P08104|CIN3_RAT___SODIUM_CHANNEL_PROTEIN,_BRAIN_III_AL...____68__0.46______1
sp|P02155|MYG_SAISC__MYOGLOBIN._________________________________66__0.54______1
sp|P04775|CIN2_RAT___SODIUM_CHANNEL_PROTEIN,_BRAIN_II_ALP...____66__0.69______1
sp|P02151|MYG_AOTTR__MYOGLOBIN._________________________________62__0.94______1
sp|P02152|MYG_CALJA__MYOGLOBIN._________________________________62__0.94______1
sp|P02153|MYG_CEBAP__MYOGLOBIN._________________________________62__0.94______1
sp|P02177|MYG_ESCGI__MYOGLOBIN._________________________________61__0.98______1
sp|P02168|MYG_GALCR__MYOGLOBIN._________________________________61__0.98______1
sp|P04774|CIN1_RAT___SODIUM_CHANNEL_PROTEIN,_BRAIN_I_ALPH...____66__0.98______2
sp|P30997|CTNN_CHICK_ALPHA_N-CATENIN_(NEURAL_ALPHA-CATENIN).____62__0.98______1
sp|P27630|PABB_STRLI_PARA-AMINOBENZOATE_SYNTHASE_COMPONEN...____53__0.994_____3
sp|P02166|MYG_PERPO__MYOGLOBIN._________________________________60__0.996_____1
sp|P02170|MYG_RABIT__MYOGLOBIN._________________________________60__0.996_____1
sp|P02154|MYG_LAGLA__MYOGLOBIN._________________________________59__0.9996____1
sp|P02161|MYG_ZALCA__MYOGLOBIN._________________________________59__0.9996____1
sp|P14682|UBC3_YEAST_UBIQUITIN-CONJUGATING_ENZYME_E2-34_K...____56__0.9996____2
sp|P15390|CIN4_RAT___SODIUM_CHANNEL_PROTEIN,_SKELETAL_MUS...____60__0.9997____1