Version 2.0

BLASTP Results

Compares an amino acid query sequence against a protein sequence.

Algorithm Citation:
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10.
Program Citation:
National Center for Biotechnology Information,Bldg 38A, NIH,8600 Rockville Pike,Bethesda, MD 20894

Glu-tRNA Ligase
Query=  S66716MIMLRIPTRSYCSPSKLIKGVGLSPLKKSLLSKKIKEDIHPSLP©ÄZ$r@
        (476 letters)
Database:  sp.prot
           59,021 sequences; 21,210,388 total letters.

Check Sequences and then Press 'Import to Workbench' to Import them to the Workbench


Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N

Accession: P48525

GLUTAMYL-TRNA SYNTHETASE, MITOCHONDIRAL (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 536

Score = 2504 (1155.9 bits)
Expect = 0.0
P = 0.0
Identities = 475/476 (99%)
Positives = 475/476 (99%)

Query:     1 SLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSER 60
             SLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSER
Subject:  61 SLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSER 120
Query:    61 KLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPPSMASYDRCCAHLGEEEIKSK 120
             KLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPPSMASYDRCCAHLGEEEIKSK
Subject: 121 KLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPPSMASYDRCCAHLGEEEIKSK 180
Query:   121 LAQGIPFTVRFKSPERYPTFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANV 180
             LAQGIPFTVRFKSPERYPTFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANV
Subject: 181 LAQGIPFTVRFKSPERYPTFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKLPTYHLANV 240
Query:   181 VDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACPKFIHIPLLTTVGDKKLSKRKGDMS 240
             VDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACPKFIHIPLLTTVGDKKLSKRKGDMS
Subject: 241 VDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACPKFIHIPLLTTVGDKKLSKRKGDMS 300
Query:   241 ISDLKRQGVLPEALINFCALFGWSPPRDLASKKHECFSMEELETIFNLNGLTKGNAKVDD 300
             ISDLKRQGVLPEALINFCALFGWSPPRDLASKKHECFSMEELETIFNLNGLTKGNAKVDD
Subject: 301 ISDLKRQGVLPEALINFCALFGWSPPRDLASKKHECFSMEELETIFNLNGLTKGNAKVDD 360
Query:   301 KKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRI 360
             KKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRI
Subject: 361 KKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRI 420
Query:   361 NDFHDEFYYFFEKPKYNDNDAVTKFLSKNESRHIAHLLKKLGQFQEGTDAQEVESMVETM 420
             NDFHDEFYYFFEKPKYNDNDAVTKFLSKNESRHIAHLLKKLGQ QEGTDAQEVESMVETM
Subject: 421 NDFHDEFYYFFEKPKYNDNDAVTKFLSKNESRHIAHLLKKLGQLQEGTDAQEVESMVETM 480
Query:   421 YYENGFSRKVTYQAMRFALAGCHPGAKIAAMIDILGIKESNKRLSEGLQFLQREKK 476
             YYENGFSRKVTYQAMRFALAGCHPGAKIAAMIDILGIKESNKRLSEGLQFLQREKK
Subject: 481 YYENGFSRKVTYQAMRFALAGCHPGAKIAAMIDILGIKESNKRLSEGLQFLQREKK 536

Accession: Q06560

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS) (FRAGMENT).


Length = 370

Score = 340 (157.0 bits)
Expect = 2.6e-88
Sum P(5) = 2.6e-88
Identities = 64/107 (59%)
Positives = 74/107 (69%)

Query:   162 DDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACPKFIHI 221
             DD +L+KSD  PTYH ANVVDDHLMGITHV+RGEEWL STPKH+ LY AFGW  P F+H+
Subject: 186 DDQVLIKSDGFPTYHFANVVDDHLMGITHVLRGEEWLSSTPKHLLLYEAFGWEAPTFLHM 245
Query:   222 PLLTTVGDKKLSKRKGDMSISDLKRQGVLPEALINFCALFGWSPPRD 268
             PLL      KLSKRK   SI   +  G + EA +NF  L G+S   D
Subject: 246 PLLLNPDGTKLSKRKNPTSIFYYRDAGYVKEAFMNFLTLMGYSMEGD 292

Score = 141 (65.1 bits)
Expect = 2.6e-88
Sum P(5) = 2.6e-88
Identities = 25/50 (50%)
Positives = 35/50 (70%)

Query:     5 ALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETP 54
             AL+N + A+  NG+ +LR+EDTDQ R  +  E+NI+  LKWC I +DE P
Subject:  28 ALFNEIFAKRFNGKMILRIEDTDQTRSRDDYEKNIFSALKWCGIQWDEGP 77

Score = 93 (42.9 bits)
Expect = 2.6e-88
Sum P(5) = 2.6e-88
Identities = 18/44 (40%)
Positives = 28/44 (63%)

Query:    54 PIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMEL 97
             P +QSER  IY +Y ++LL +  AY+CF + + L ++R  A  L
Subject:  85 PYRQSERTEIYREYAELLLKTDYAYKCFATPKELEEMRAVATTL 128

Score = 72 (33.2 bits)
Expect = 2.6e-88
Sum P(5) = 2.6e-88
Identities = 18/52 (34%)
Positives = 28/52 (53%)

Query:   275 ECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQKRILNPSTLRELVD 326
             E +S+E+L   F+   + K  A  D +KL + NKH+L     + S L +L D
Subject: 294 EIYSLEKLIANFDPRRIGKSGAVFDTRKLDWMNKHYLTHEKSSESLLAKLKD 345

Score = 71 (32.8 bits)
Expect = 2.6e-88
Sum P(5) = 2.6e-88
Identities = 13/30 (43%)
Positives = 20/30 (66%)

Query:   105 YDRCCAHLGEEEIKSKLAQGIPFTVRFKSP 134
             YDR   +L  EEI+++  +G P+T+R K P
Subject: 134 YDRRYRYLSPEEIEARTREGQPYTIRLKVP 163

Accession: P22249

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 489

Score = 220 (101.6 bits)
Expect = 3.1e-84
Sum P(7) = 3.1e-84
Identities = 41/83 (49%)
Positives = 56/83 (67%)

Query:   153 QVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFG 212
             +V F  K   D ++VK++ +PTY+ A V+DDHLM I+HV RGEE L +TPK + +Y  FG
Subject: 175 KVTFESKDIGDWVIVKANGIPTYNFAVVIDDHLMEISHVFRGEEHLSNTPKQLMVYEYFG 234
Query:   213 WACPKFIHIPLLTTVGDKKLSKR 235
             W  P+F H+ L+     KKLSKR
Subject: 235 WEPPQFAHLTLIVNEQRKKLSKR 257

Score = 144 (66.5 bits)
Expect = 3.1e-84
Sum P(7) = 3.1e-84
Identities = 26/51 (50%)
Positives = 39/51 (76%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDET 53
             RTAL+NYL AR+  G+ ++R+EDTD +R +EG E++  E L+W  I+YDE+
Subject:  23 RTALFNYLFARHHGGKMIVRIEDTDIERNVEGGEQSQLENLQWLGIDYDES 73

Score = 98 (45.2 bits)
Expect = 3.1e-84
Sum P(7) = 3.1e-84
Identities = 19/34 (55%)
Positives = 23/34 (67%)

Query:    54 PIKQSERKLIYDKYVKILLSSGKAYRCFCSKERL 87
             P +Q+ER  IY KYV  LL  G AY+CFC+ E L
Subject:  82 PYRQTERLDIYRKYVDELLEQGHAYKCFCTPEEL 115

Score = 82 (37.9 bits)
Expect = 3.1e-84
Sum P(7) = 3.1e-84
Identities = 15/25 (60%)
Positives = 17/25 (68%)

Query:   241 ISDLKRQGVLPEALINFCALFGWSP 265
             +S  K  G LPEA+ NF AL GWSP
Subject: 265 VSQYKELGYLPEAMFNFFALLGWSP 289

Score = 74 (34.2 bits)
Expect = 3.1e-84
Sum P(7) = 3.1e-84
Identities = 15/41 (36%)
Positives = 26/41 (63%)

Query:   273 KHECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQK 313
             + E FS +EL  IF+++ L+K  +  D KKL + N  +++K
Subject: 292 EEEIFSKDELIRIFDVSRLSKSPSMFDTKKLTWMNNQYIKK 332

Score = 65 (30.0 bits)
Expect = 3.1e-84
Sum P(7) = 3.1e-84
Identities = 13/31 (41%)
Positives = 17/31 (54%)

Query:   105 YDRCCAHLGEEEIKSKLAQGIPFTVRFKSPE 135
             Y   C  L  E++    AQG P+T+R K PE
Subject: 132 YSGKCRRLTPEQVAELEAQGKPYTIRLKVPE 162

Score = 60 (27.7 bits)
Expect = 3.1e-84
Sum P(7) = 3.1e-84
Identities = 15/60 (25%)
Positives = 30/60 (50%)

Query:   410 AQEVESMVETMYYENGFSRKVTYQAMRFALAGCHPGAKIAAMIDILGIKESNKRLSEGLQ 469
             A E+++ ++ +    G   K  +  +R A+ G   G ++   I +LG ++  +RL   LQ
Subject: 427 ADEIKAAIKAVQKATGQKGKKLFMPIRAAVTGQTHGPELPFAIQLLGKQKVIERLERALQ 486

Score = 38 (17.5 bits)
Expect = 1.1e-36
Sum P(6) = 1.1e-36
Identities = 5/7 (71%)
Positives = 6/7 (85%)

Query:   261 FGWSPPR 267
             FGW PP+
Subject: 233 FGWEPPQ 239

Accession: P27000

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 468

Score = 337 (155.6 bits)
Expect = 9.8e-76
Sum P(6) = 9.8e-76
Identities = 64/117 (54%)
Positives = 81/117 (69%)

Query:   150 LQPQVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYN 209
             L+  V ++++   D++L+KSD  PTYHLANVVDDHLMG+T VIR EEWL STP H+ LY 
Subject: 162 LRGVVVYDNQEIPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYR 221
Query:   210 AFGWACPKFIHIPLLTTVGDKKLSKRKGDMSISDLKRQGVLPEALINFCALFGWSPP 266
             AFGW  P+F H+PLL      K+SKRK   S+   K +G LPEAL N+  L G+S P
Subject: 222 AFGWEAPRFYHMPLLRNPDKTKISKRKSHTSLDWYKAEGFLPEALRNYLCLMGFSMP 278

Score = 147 (67.9 bits)
Expect = 9.8e-76
Sum P(6) = 9.8e-76
Identities = 26/50 (52%)
Positives = 35/50 (70%)

Query:     5 ALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETP 54
             AL+NY  AR   G+F++R+EDTD+ R + GAEE I   LKW  ++YDE P
Subject:  22 ALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALKWLGLSYDEGP 71

Score = 85 (39.2 bits)
Expect = 9.8e-76
Sum P(6) = 9.8e-76
Identities = 18/38 (47%)
Positives = 23/38 (60%)

Query:    54 PIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLR 91
             P +QSER  +Y KY + LL  G AYR F + E L  +R
Subject:  79 PYRQSERLPLYQKYAEELLKRGWAYRAFETPEELEQIR 116

Score = 45 (20.8 bits)
Expect = 9.8e-76
Sum P(6) = 9.8e-76
Identities = 9/30 (30%)
Positives = 15/30 (50%)

Query:   105 YDRCCAHLGEEEIKSKLAQGIPFTVRFKSP 134
             YD    ++  EE + +  +G P  +R K P
Subject: 122 YDGRARNIPPEEAEERARRGEPHVIRLKVP 151

Score = 44 (20.3 bits)
Expect = 9.8e-76
Sum P(6) = 9.8e-76
Identities = 15/64 (23%)
Positives = 27/64 (42%)

Query:   405 QEGTDAQEVESMVETMYYENGFSRKVTYQAMRFALAGCHPGAKIAAMIDILGIKESNKRL 464
             QE      +E+++     E G       Q +R AL G      +  ++ +LG + + +RL
Subject: 404 QEEWTEAALEALLRGFAAEKGVKLGQVAQPLRAALTGSLETPGLFEILALLGKERALRRL 463
Query:   465 SEGL 468
                L
Subject: 464 ERAL 467

Score = 42 (19.4 bits)
Expect = 9.8e-76
Sum P(6) = 9.8e-76
Identities = 10/39 (25%)
Positives = 20/39 (51%)

Query:   275 ECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQK 313
             E F++EE    F    ++ G    D +KL + N  ++++
Subject: 282 EIFTLEEFIQAFTWERVSLGGPVFDLEKLRWMNGKYIRE 320

Score = 34 (15.7 bits)
Expect = 8.0e-25
Sum P(6) = 8.0e-25
Identities = 5/7 (71%)
Positives = 5/7 (71%)

Query:   261 FGWSPPR 267
             FGW  PR
Subject: 223 FGWEAPR 229

Accession: P22250

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 483

Score = 214 (98.8 bits)
Expect = 1.1e-72
Sum P(7) = 1.1e-72
Identities = 38/83 (45%)
Positives = 55/83 (66%)

Query:   153 QVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFG 212
             +++F      D ++VK D  PTY+ A  +DD+LM +THV+RGE+ + +TPK I +Y AFG
Subject: 174 EISFESDGIGDFVIVKKDGTPTYNFAVAIDDYLMKMTHVLRGEDHISNTPKQIMIYQAFG 233
Query:   213 WACPKFIHIPLLTTVGDKKLSKR 235
             W  P+F H+ L+     KKLSKR
Subject: 234 WDIPQFGHMTLIVNESRKKLSKR 256

Score = 161 (74.3 bits)
Expect = 1.1e-72
Sum P(7) = 1.1e-72
Identities = 29/51 (56%)
Positives = 40/51 (78%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDET 53
             RTAL+NYL ARN  G+F++R+EDTD+KR IEG E++    LKW  I++DE+
Subject:  23 RTALFNYLFARNQGGKFIIRVEDTDKKRNIEGGEQSQLNYLKWLGIDWDES 73

Score = 93 (42.9 bits)
Expect = 1.1e-72
Sum P(7) = 1.1e-72
Identities = 18/38 (47%)
Positives = 24/38 (63%)

Query:    54 PIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLR 91
             P +QSER  IY  Y + LL  G AY+C+C++E L   R
Subject:  82 PYRQSERNDIYKVYYEELLEKGLAYKCYCTEEELEKER 119

Score = 78 (36.0 bits)
Expect = 1.1e-72
Sum P(7) = 1.1e-72
Identities = 15/25 (60%)
Positives = 15/25 (60%)

Query:   241 ISDLKRQGVLPEALINFCALFGWSP 265
             I   K  G LPEAL NF  L GWSP
Subject: 264 IEQYKELGYLPEALFNFIGLLGWSP 288

Score = 63 (29.1 bits)
Expect = 1.1e-72
Sum P(7) = 1.1e-72
Identities = 14/41 (34%)
Positives = 24/41 (58%)

Query:   273 KHECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQK 313
             + E F+ E+   IF++N L+K  A  D  KL + N  +++K
Subject: 291 EEELFTKEQFIEIFDVNRLSKSPALFDMHKLKWVNNQYVKK 331

Score = 53 (24.5 bits)
Expect = 1.1e-72
Sum P(7) = 1.1e-72
Identities = 11/52 (21%)
Positives = 28/52 (53%)

Query:   413 VESMVETMYYENGFSRKVTYQAMRFALAGCHPGAKIAAMIDILGIKESNKRL 464
             +++ ++ +  E G   K  +  +R A+ G   G ++   I+++G + + +RL
Subject: 429 IKASIKAVQKETGHKGKKLFMPIRVAVTGQTHGPELPQSIELIGKETAIQRL 480

Score = 42 (19.4 bits)
Expect = 1.1e-72
Sum P(7) = 1.1e-72
Identities = 9/24 (37%)
Positives = 16/24 (66%)

Query:   112 LGEEEIKSKLAQGIPFTVRFKSPE 135
             L +EE +  +A+G   ++RF+ PE
Subject: 138 LTQEEQEKFIAEGRKPSIRFRVPE 161

Accession: P15189

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 485

Score = 289 (133.4 bits)
Expect = 4.6e-70
Sum P(6) = 4.6e-70
Identities = 57/100 (57%)
Positives = 67/100 (67%)

Query:   162 DDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACPKFIHI 221
             D  +L+K+D +PTYH+ANVVDDHLM ITHV RGEEWL S PKHI +Y   G   P F+H+
Subject: 184 DMQVLLKADGMPTYHMANVVDDHLMKITHVARGEEWLASVPKHILIYQYLGLEPPVFMHL 243
Query:   222 PLLTTVGDKKLSKRKGDMSISDLKRQGVLPEALINFCALF 261
              L+      KLSKRK   SIS     G LPEAL+NF  LF
Subject: 244 SLMRNADKSKLSKRKNPTSISYYTALGYLPEALMNFLGLF 283

Score = 127 (58.6 bits)
Expect = 4.6e-70
Sum P(6) = 4.6e-70
Identities = 22/50 (44%)
Positives = 32/50 (64%)

Query:     5 ALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETP 54
             AL+NYL A+   G+F+LR+EDTD  R     E+ + + LKWC + + E P
Subject:  26 ALFNYLFAKKHGGKFILRIEDTDATRSTPEFEKKVLDALKWCGLEWSEGP 75

Score = 107 (49.4 bits)
Expect = 4.6e-70
Sum P(6) = 4.6e-70
Identities = 18/40 (45%)
Positives = 29/40 (72%)

Query:    54 PIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHS 93
             P +QS+RK IY  YV+ ++++G  +RCFC+ ERL  +R +
Subject:  83 PYRQSDRKDIYKPYVEKIVANGHGFRCFCTPERLEQMREA 122

Score = 64 (29.5 bits)
Expect = 4.6e-70
Sum P(6) = 4.6e-70
Identities = 13/30 (43%)
Positives = 16/30 (53%)

Query:   105 YDRCCAHLGEEEIKSKLAQGIPFTVRFKSP 134
             YD  C  L  EE+ S++  G P  VR K P
Subject: 132 YDGLCLSLSAEEVTSRVDAGEPHVVRMKIP 161

Score = 57 (26.3 bits)
Expect = 4.6e-70
Sum P(6) = 4.6e-70
Identities = 13/41 (31%)
Positives = 24/41 (58%)

Query:   275 ECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQKRI 315
             E  +MEEL   F+   L+K  A  D +KL + N  ++++++
Subject: 292 ELLTMEELAEKFDPENLSKAGAIFDIQKLDWLNARWIREKL 332

Score = 36 (16.6 bits)
Expect = 4.6e-70
Sum P(6) = 4.6e-70
Identities = 8/19 (42%)
Positives = 11/19 (57%)

Query:   454 ILGIKESNKRLSEGLQFLQ 472
             +L     N+RL EGL+  Q
Subject: 341 VLAWAMDNERLKEGLKLSQ 359

Score = 35 (16.2 bits)
Expect = 7.3e-70
Sum P(6) = 7.3e-70
Identities = 9/44 (20%)
Positives = 19/44 (43%)

Query:   317 NPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRI 360
             +P  + ++++ + P LE I   +  S E   +     G  L  +
Subject: 393 SPEEMLKILNTVQPDLEKILEWNKDSIETELRASERMGKKLKAV 436

Accession: P43818

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 480

Score = 241 (111.3 bits)
Expect = 4.4e-58
Sum P(5) = 4.4e-58
Identities = 48/133 (36%)
Positives = 75/133 (56%)

Query:   153 QVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFG 212
             ++  ++   DDLI+ ++D  PTY+   VVDD  MGITHV+RGE+ + +TP+ I +  A G
Subject: 170 RIEISNSELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNTPRQINILKAIG 229
Query:   213 WACPKFIHIPLLTTVGDKKLSKRKGDMSISDLKRQGVLPEALINFCALFGWSPPRDLASK 272
                P + H+ ++     +KLSKR G +S+   +  G LPEALIN+    GW         
Subject: 230 APIPTYAHVSMINGDDGQKLSKRHGAVSVMQYRDDGYLPEALINYLVRLGWGHGDQEIFS 289
Query:   273 KHECFSMEELETI 285
             + E  +  EL+ +
Subject: 290 REEMINYFELDHV 302

Score = 209 (96.5 bits)
Expect = 4.4e-58
Sum P(5) = 4.4e-58
Identities = 39/96 (40%)
Positives = 64/96 (66%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSERKL 62
             RTALY++L A++ NG+F+LR+EDTD +R    A   I E ++W N+ ++  P  Q++R  
Subject:  33 RTALYSWLYAKHNNGEFVLRIEDTDLERSTPEATAAIIEGMEWLNLPWEHGPYYQTKRFD 92
Query:    63 IYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELK 98
              Y++ +  ++  G AYRC+C+KE L +LRH+  + K
Subject:  93 RYNQVIDEMIEQGLAYRCYCTKEHLEELRHTQEQNK 128

Score = 65 (30.0 bits)
Expect = 4.4e-58
Sum P(5) = 4.4e-58
Identities = 12/39 (30%)
Positives = 25/39 (64%)

Query:   275 ECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQK 313
             E FS EE+   F L+ ++K  +  + +KL + N+H++++
Subject: 286 EIFSREEMINYFELDHVSKSASAFNTEKLQWLNQHYIRE 324

Score = 44 (20.3 bits)
Expect = 4.4e-58
Sum P(5) = 4.4e-58
Identities = 11/33 (33%)
Positives = 17/33 (51%)

Query:   369 YFFEKPKYNDNDAVTKFLSKNESRHIAHLLKKL 401
             YFFE+ +  D  A  K    N +  +A + +KL
Subject: 374 YFFEEFETFDEAAAKKHFKGNAAEALAKVKEKL 406

Score = 34 (15.7 bits)
Expect = 4.4e-58
Sum P(5) = 4.4e-58
Identities = 6/9 (66%)
Positives = 7/9 (77%)

Query:   126 PFTVRFKSP 134
             P  VRFK+P
Subject: 148 PHVVRFKNP 156

Accession: P04805

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 471

Score = 234 (108.0 bits)
Expect = 1.8e-54
Sum P(4) = 1.8e-54
Identities = 46/111 (41%)
Positives = 68/111 (61%)

Query:   154 VNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGW 213
             + F+++  DDLI+ ++D  PTY+   VVDD  M ITHVIRGE+ + +TP+ I +  A   
Subject: 160 IEFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALKA 219
Query:   214 ACPKFIHIPLLTTVGDKKLSKRKGDMSISDLKRQGVLPEALINFCALFGWS 264
               P + H+ ++     KKLSKR G +S+   +  G LPEAL+N+    GWS
Subject: 220 PVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWS 270

Score = 212 (97.9 bits)
Expect = 1.8e-54
Sum P(4) = 1.8e-54
Identities = 42/93 (45%)
Positives = 60/93 (64%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSERKL 62
             RTALY++L ARN  G+F+LR+EDTD +R    A E I + + W ++ +DE P  Q++R  
Subject:  21 RTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFD 80
Query:    63 IYDKYVKILLSSGKAYRCFCSKERLNDLRHSAM 95
              Y+  +  +L  G AY+C+CSKERL  LR   M
Subject:  81 RYNAVIDQMLEEGTAYKCYCSKERLEALREEQM 113

Score = 62 (28.6 bits)
Expect = 1.8e-54
Sum P(4) = 1.8e-54
Identities = 12/37 (32%)
Positives = 21/37 (56%)

Query:   275 ECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFL 311
             E F+ EE+   F LN ++K  +  +  KL + N H++
Subject: 275 EIFTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYI 311

Score = 37 (17.1 bits)
Expect = 1.8e-54
Sum P(4) = 1.8e-54
Identities = 12/50 (24%)
Positives = 20/50 (40%)

Query:   337 NTSTISREKVAKILLNCGGSLSRINDFHDEFYYFFEKPKYNDNDAVTKFL 386
             N  T +  ++A ++   G     + +      YF+E     D DA  K L
Subject: 331 NIDTRNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHL 380

Accession: P47700

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 484

Score = 122 (56.3 bits)
Expect = 1.6e-45
Sum P(7) = 1.6e-45
Identities = 21/51 (41%)
Positives = 38/51 (74%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDET 53
             RTA++N+LLA++ NG+F++R+EDTD +R I+    + ++ L+W  +  DE+
Subject:  22 RTAIFNFLLAKHFNGEFIIRIEDTDTERNIKEGINSQFDNLRWLGVIADES 72

Score = 112 (51.7 bits)
Expect = 1.6e-45
Sum P(7) = 1.6e-45
Identities = 21/61 (34%)
Positives = 38/61 (62%)

Query:   153 QVNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFG 212
             Q+        D++++K++ + TY+ A V+DD+ M IT V+RG E + +T   +A+Y A G
Subject: 173 QITIPGSALTDIVILKANGVATYNFAVVIDDYDMEITDVLRGAEHISNTAYQLAIYQALG 232
Query:   213 W 213
             +
Subject: 233 F 233

Score = 90 (41.5 bits)
Expect = 1.6e-45
Sum P(7) = 1.6e-45
Identities = 18/42 (42%)
Positives = 24/42 (57%)

Query:    54 PIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAM 95
             P  QS++  +Y K    L+    AYRCFCSKE+L   R  A+
Subject:  81 PYLQSQKLAVYKKLAFDLIEKNLAYRCFCSKEKLESDRKQAI 122

Score = 88 (40.6 bits)
Expect = 1.6e-45
Sum P(7) = 1.6e-45
Identities = 16/25 (64%)
Positives = 18/25 (72%)

Query:   241 ISDLKRQGVLPEALINFCALFGWSP 265
             I   K+QG LPEAL+NF AL GW P
Subject: 264 IEQFKQQGYLPEALLNFLALLGWHP 288

Score = 50 (23.1 bits)
Expect = 1.6e-45
Sum P(7) = 1.6e-45
Identities = 11/39 (28%)
Positives = 24/39 (61%)

Query:   275 ECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFLQK 313
             E F++++L   F+L+ +    A  D KKL + N +++++
Subject: 293 EFFNLKQLIENFSLSRVVSAPAFFDIKKLQWINANYIKQ 331

Score = 48 (22.2 bits)
Expect = 1.6e-45
Sum P(7) = 1.6e-45
Identities = 9/24 (37%)
Positives = 15/24 (62%)

Query:   109 CAHLGEEEIKSKLAQGIPFTVRFK 132
             C +L  ++I + L +  PFT+R K
Subject: 134 CRNLHSKKITNHLEKNDPFTIRLK 157

Score = 47 (21.7 bits)
Expect = 1.6e-45
Sum P(7) = 1.6e-45
Identities = 9/20 (45%)
Positives = 13/20 (65%)

Query:   216 PKFIHIPLLTTVGDKKLSKR 235
             P+F H+ ++     KKLSKR
Subject: 237 PRFGHLSVIVDESGKKLSKR 256

Accession: P53662

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 468

Score = 172 (79.4 bits)
Expect = 5.1e-39
Sum P(4) = 5.1e-39
Identities = 34/79 (43%)
Positives = 50/79 (63%)

Query:   157 NDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACP 216
             N     D I++KSD  PTY+ A V+DD  M I+H++RGEE + +TPK + +Y+      P
Subject: 178 NSNDIGDWIIIKSDDYPTYNFAVVIDDIDMEISHILRGEEHITNTPKQMMIYDYLNAPKP 237
Query:   217 KFIHIPLLTTVGDKKLSKR 235
              F H+ ++T +  KKLSKR
Subject: 238 LFGHLTIITNMEGKKLSKR 256

Score = 163 (75.2 bits)
Expect = 5.1e-39
Sum P(4) = 5.1e-39
Identities = 31/58 (53%)
Positives = 43/58 (74%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSER 60
             RTAL+NYLLA++ NG F++R+EDTD KR I   E +  E LKW NI  +E+P+K +E+
Subject:  22 RTALFNYLLAKHYNGDFIIRIEDTDVKRNIADGEASQIENLKWLNIEANESPLKPNEK 79

Score = 54 (24.9 bits)
Expect = 5.1e-39
Sum P(4) = 5.1e-39
Identities = 10/35 (28%)
Positives = 17/35 (48%)

Query:   241 ISDLKRQGVLPEALINFCALFGWSPPRDLASKKHE 275
             I + K +G   +A+ NF  L GW+  +      H+
Subject: 264 IHEYKEEGYNSQAIFNFLTLLGWTDEKARELMDHD 298

Score = 53 (24.5 bits)
Expect = 5.1e-39
Sum P(4) = 5.1e-39
Identities = 12/44 (27%)
Positives = 23/44 (52%)

Query:    54 PIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMEL 97
             P +QS++   Y K    L+  G AY+ + + E L + +  + +L
Subject:  82 PYRQSQKLEKYLKIAHELIEKGYAYKAYDNSEELEEQKKHSEKL 125

Score = 45 (20.8 bits)
Expect = 1.1e-37
Sum P(4) = 1.1e-37
Identities = 11/39 (28%)
Positives = 19/39 (48%)

Query:   272 KKHECFSMEELETIFNLNGLTKGNAKVDDKKLWFFNKHF 310
             K  E    +E+   F    L+K  +K D  K+ +F+K +
Subject: 290 KARELMDHDEIIKSFLYTRLSKSPSKFDITKMQWFSKQY 328

Accession: P45631

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS).


Length = 451

Score = 112 (51.7 bits)
Expect = 1.9e-35
Sum P(7) = 1.9e-35
Identities = 23/57 (40%)
Positives = 34/57 (59%)

Query:   154 VNFNDKRYDDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNA 210
             V+F      D +L++ D  P Y L +VVDD  + ITHVIRGE+ + +T   I ++ A
Subject: 163 VHFEGAALSDPVLIREDGRPLYTLTSVVDDADLAITHVIRGEDHVANTAVQIQIFEA 219

Score = 106 (48.9 bits)
Expect = 1.9e-35
Sum P(7) = 1.9e-35
Identities = 22/51 (43%)
Positives = 30/51 (58%)

Query:     1 SLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYD 51
             ++R AL N+L AR   G FLLRL+DTD++R      E I   L W  + +D
Subject:  19 NVRLALVNWLFARKAGGNFLLRLDDTDEERSKPEYAEGIERDLTWLGLTWD 69

Score = 78 (36.0 bits)
Expect = 1.9e-35
Sum P(7) = 1.9e-35
Identities = 15/36 (41%)
Positives = 22/36 (61%)

Query:   212 GWACPKFIHIPLLTTVGDKKLSKRKGDMSISDLKRQ 247
             G   P F H+PLLT    + LSKR G +S++ L+ +
Subject: 226 GGVVPVFAHLPLLTDATGQGLSKRLGSLSVASLREE 261

Score = 61 (28.2 bits)
Expect = 1.9e-35
Sum P(7) = 1.9e-35
Identities = 15/45 (33%)
Positives = 24/45 (53%)

Query:    56 KQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPP 100
             ++S+R   YD+    L +SG+ Y C+ + E LN  R S +    P
Subject:  73 RESDRYGRYDEVAAALKASGRLYPCYETPEELNLKRASLVSQGRP 117

Score = 51 (23.5 bits)
Expect = 1.9e-35
Sum P(7) = 1.9e-35
Identities = 13/47 (27%)
Positives = 22/47 (46%)

Query:   105 YDRCCAHLGEEEIKSKLAQGIPFTVRFKSPERYPTFTDLLHGQINLQ 151
             YDR    LG+ +     ++G     RFK       +TDL+ G ++ +
Subject: 120 YDRAALRLGDADRARLESEGRKRHWRFKLEHTPVEWTDLVRGPVHFE 166

Score = 45 (20.8 bits)
Expect = 1.9e-35
Sum P(7) = 1.9e-35
Identities = 11/43 (25%)
Positives = 22/43 (51%)

Query:   423 ENGFSRKVTYQAMRFALAGCHPGAKIAAMIDILGIKESNKRLS 465
             + G   K  +  +R AL G   G ++  ++ ++G   + KRL+
Subject: 405 KTGRKGKDLFLPLRRALTGRDHGPELKNLLPLIGRTRAEKRLA 447

Score = 36 (16.6 bits)
Expect = 1.9e-35
Sum P(7) = 1.9e-35
Identities = 8/34 (23%)
Positives = 18/34 (52%)

Query:   278 SMEELETIFNLNGLTKGNAKVDDKKLWFFNKHFL 311
             +++EL   F++  +++   K D ++L   N   L
Subject: 287 TLDELVAEFDIAKVSRATPKFDPEELLRLNARIL 320

Accession: P27305

HYPOTHETICAL 29.3 KD PROTEIN IN PCNB-DKSA INTERGENIC REGION.


Length = 256

Score = 173 (79.9 bits)
Expect = 5.0e-30
Sum P(2) = 5.0e-30
Identities = 32/74 (43%)
Positives = 46/74 (62%)

Query:   162 DDLILVKSDKLPTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACPKFIHI 221
             +D I+ + D L  Y+LA VVDDH  G+T ++RG + +  T + I+LY  FGW  P +IH+
Subject: 169 EDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHL 228
Query:   222 PLLTTVGDKKLSKR 235
             PL       KLSK+
Subject: 229 PLALNPQGAKLSKQ 242

Score = 133 (61.4 bits)
Expect = 5.0e-30
Sum P(2) = 5.0e-30
Identities = 31/90 (34%)
Positives = 50/90 (55%)

Query:     1 SLRTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSER 60
             SL  AL +YL AR   G++L+R+ED D  R + GA E I   L+   +++D   + QS+R
Subject:  32 SLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQR 91
Query:    61 KLIYDKYVKILLSSGKAYRCFCSKERLNDL 90
                Y + +  L   G +Y C C++ R+  +
Subject:  92 HDAYREALAWLHEQGLSYYCTCTRARIQSI 121

Score = 34 (15.7 bits)
Expect = 8.8e-10
Sum P(2) = 8.8e-10
Identities = 6/12 (50%)
Positives = 7/12 (58%)

Query:   255 INFCALFGWSPP 266
             I+   LFGW  P
Subject: 212 ISLYQLFGWKVP 223

Accession: P31970

GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS) (FRAGMENT).


Length = 159

Score = 178 (82.2 bits)
Expect = 4.0e-17
P = 4.0e-17
Identities = 36/89 (40%)
Positives = 54/89 (60%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSERKL 62
             RTA++N+L A +  G F+LR+EDTD +R      ENI   L+W  +++DE P  Q++R  
Subject:  21 RTAVFNWLFAHHHGGTFVLRVEDTDLERSKPEYTENIKTGLQWLGLHWDEGPFFQTQRLD 80
Query:    63 IYDKYVKILLSSGKAYRCFCSKERLNDLR 91
              Y   ++ LL  G AYRC+C+   L  +R
Subject:  81 QYKAAIQTLLDQGLAYRCYCTPAELEAMR 109

Accession: P07814

MULTIFUNCTIONAL AMINOACYL-TRNA SYNTHETASE (CONTAINS: GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE), AND PROLYL-TRNA SYNTHETASE (EC 6.1.1.15) (PROLINE--TRNA LIGASE)).


Length = 1440

Score = 56 (25.9 bits)
Expect = 0.014
Sum P(4) = 0.014
Identities = 11/30 (36%)
Positives = 17/30 (56%)

Query:   168 KSDKLPTYHLANVVDDHLMGITHVIRGEEW 197
             K +  PTY  A  + D + G+TH +R  E+
Subject: 298 KYNVYPTYDFACPIVDSIEGVTHALRTTEY 327

Score = 54 (24.9 bits)
Expect = 0.014
Sum P(4) = 0.014
Identities = 14/50 (28%)
Positives = 26/50 (52%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDE 52
             + AL N     N  G+ ++R +DT+ ++  E  E+ I E +   +I  D+
Subject: 144 KAALLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHIKPDQ 193

Score = 42 (19.4 bits)
Expect = 0.014
Sum P(4) = 0.014
Identities = 11/33 (33%)
Positives = 16/33 (48%)

Query:    66 KYVKILLSSGKAYRCFCSKERLNDLRHSAMELK 98
             KY + L+  GKAY      E++   R   +E K
Subject: 206 KYAEKLIQEGKAYVDDTPAEQMKAEREQRIESK 238

Score = 41 (18.9 bits)
Expect = 0.014
Sum P(4) = 0.014
Identities = 8/31 (25%)
Positives = 16/31 (51%)

Query:   278 SMEELETIFNLNGLTKGNAKVDDKKLWFFNK 308
             ++E L+      G ++    ++  K+W FNK
Subject: 395 TVEGLKQFIAAQGSSRSVVNMEWDKIWAFNK 425

Score = 34 (15.7 bits)
Expect = 6.0
Sum P(4) = 1.0
Identities = 6/18 (33%)
Positives = 9/18 (50%)

Query:   199 PSTPKHIALYNAFGWACP 216
             P T     +Y  + +ACP
Subject: 293 PRTGNKYNVYPTYDFACP 310

Accession: P47897

GLUTAMINYL-TRNA SYNTHETASE (EC 6.1.1.18) (GLUTAMINE--TRNA LIGASE) (GLNRS).


Length = 775

Score = 59 (27.2 bits)
Expect = 0.019
Sum P(3) = 0.019
Identities = 11/23 (47%)
Positives = 17/23 (73%)

Query:   240 SISDLKRQGVLPEALINFCALFG 262
             +++ L+R+G  PEA+ NFCA  G
Subject: 518 TLTALRRRGFPPEAINNFCARVG 540

Score = 52 (24.0 bits)
Expect = 0.019
Sum P(3) = 0.019
Identities = 13/44 (29%)
Positives = 20/44 (45%)

Query:   173 PTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFGWACP 216
             PTY   + + D +  ITH +  +E+      +  L NA    CP
Subject: 436 PTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCNALDVYCP 479

Score = 43 (19.9 bits)
Expect = 0.019
Sum P(3) = 0.019
Identities = 8/24 (33%)
Positives = 15/24 (62%)

Query:     7 YNYLLARNTNGQFLLRLEDTDQKR 30
             +N+  A+  NG   LR +DT+ ++
Subject: 286 FNFGYAKANNGICFLRFDDTNPEK 309

Accession: P13188

GLUTAMINYL-TRNA SYNTHETASE (EC 6.1.1.18) (GLUTAMINE--TRNA LIGASE) (GLNRS).


Length = 809

Score = 55 (25.4 bits)
Expect = 0.046
Sum P(4) = 0.045
Identities = 8/22 (36%)
Positives = 15/22 (68%)

Query:    66 KYVKILLSSGKAYRCFCSKERL 87
             +  ++L+ +GKAY C C+ E +
Subject: 332 RLAEVLIKNGKAYVCHCTAEEI 353

Score = 50 (23.1 bits)
Expect = 0.046
Sum P(4) = 0.045
Identities = 11/43 (25%)
Positives = 22/43 (51%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKW 45
             +  + N+  A+  NG   LR +DT+ ++      E+I  ++ W
Subject: 270 KAIMVNFGYAKYHNGTCYLRFDDTNPEKEAPEYFESIKRMVSW 312

Score = 40 (18.5 bits)
Expect = 0.046
Sum P(4) = 0.045
Identities = 7/23 (30%)
Positives = 15/23 (65%)

Query:   240 SISDLKRQGVLPEALINFCALFG 262
             ++  ++R+GV P A+++F    G
Subject: 520 TLEAIRRRGVPPGAILSFINTLG 542

Score = 38 (17.5 bits)
Expect = 0.046
Sum P(4) = 0.045
Identities = 7/18 (38%)
Positives = 10/18 (55%)

Query:   173 PTYHLANVVDDHLMGITH 190
             PTY   + + D +  ITH
Subject: 438 PTYDFTHCLVDSMENITH 455

Accession: P46655

GLUTAMYL-TRNA SYNTHETASE, CYTOPLASMIC (EC 6.1.1.17) (GLUTAMATE--TRNA LIGASE) (GLURS) (P85).


Length = 724

Score = 65 (30.0 bits)
Expect = 0.11
Sum P(2) = 0.11
Identities = 17/69 (24%)
Positives = 33/69 (47%)

Query:     3 RTALYNYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSERKL 62
             + AL N   A+   G+ ++R +DT+  +  E  +++I E L    I  D         + 
Subject: 236 KAALLNQYFAQAYKGKLIIRFDDTNPSKEKEEFQDSILEDLDLLGIKGDRITYSSDYFQE 295
Query:    63 IYDKYVKIL 71
             +YD  V+++
Subject: 296 MYDYCVQMI 304

Score = 48 (22.2 bits)
Expect = 0.11
Sum P(2) = 0.11
Identities = 9/25 (36%)
Positives = 14/25 (56%)

Query:   173 PTYHLANVVDDHLMGITHVIRGEEW 197
             PTY     + D + G+TH +R  E+
Subject: 396 PTYDFCVPIVDAIEGVTHALRTIEY 420

Accession: P44068

HYPOTHETICAL PROTEIN HI0882.


Length = 245

Score = 71 (32.8 bits)
Expect = 0.26
P = 0.23
Identities = 15/44 (34%)
Positives = 25/44 (56%)

Query:   108 CCAHLGEEEIKSKLAQGIPFTVRFKSPERYPTFTDLLHGQINLQ 151
             CCA    E +++ LA GI FT+ F +P  +P    L+  + N++
Subject:  52 CCAPCSGEVMEAILASGIEFTIYFYNPNIHPLKEYLIRKEENIR 95

Accession: P43831

GLUTAMINYL-TRNA SYNTHETASE (EC 6.1.1.18) (GLUTAMINE--TRNA LIGASE) (GLNRS).


Length = 557

Score = 53 (24.5 bits)
Expect = 0.75
Sum P(3) = 0.53
Identities = 20/89 (22%)
Positives = 37/89 (41%)

Query:     8 NYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSERKLIYDKY 67
             N+ LA+   G   LR +DT+  +      ++I   ++W    ++  P   S+       Y
Subject:  59 NFGLAKEYQGLCNLRFDDTNPVKEDVEYVDSIKADVEWLGFKWEGEPRYASDYFDALYGY 118
Query:    68 VKILLSSGKAYRCFCSKERLNDLRHSAME 96
                L+  G AY    S + + + R +  E
Subject: 119 AVELIKKGLAYVDELSPDEMREYRGTLTE 147

Score = 50 (23.1 bits)
Expect = 0.75
Sum P(3) = 0.53
Identities = 10/23 (43%)
Positives = 14/23 (60%)

Query:   240 SISDLKRQGVLPEALINFCALFG 262
             +IS L+R+G  P +L  FC   G
Subject: 302 TISGLRRRGYTPASLREFCRRIG 324

Score = 36 (16.6 bits)
Expect = 0.75
Sum P(3) = 0.53
Identities = 7/20 (35%)
Positives = 10/20 (50%)

Query:   173 PTYHLANVVDDHLMGITHVI 192
             P Y   + + D +  ITH I
Subject: 218 PMYDFTHCISDAIERITHSI 237

Accession: P00962

GLUTAMINYL-TRNA SYNTHETASE (EC 6.1.1.18) (GLUTAMINE--TRNA LIGASE) (GLNRS).


Length = 553

Score = 53 (24.5 bits)
Expect = 1.3
Sum P(3) = 0.73
Identities = 19/84 (22%)
Positives = 38/84 (45%)

Query:     8 NYLLARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSERKLIYDKY 67
             N+ +A++  GQ  LR +DT+  +      E+I   ++W   ++       S+       Y
Subject:  50 NFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAY 109
Query:    68 VKILLSSGKAYRCFCSKERLNDLR 91
                L++ G AY    + E++ + R
Subject: 110 AIELINKGLAYVDELTPEQIREYR 133

Score = 44 (20.3 bits)
Expect = 1.3
Sum P(3) = 0.73
Identities = 8/18 (44%)
Positives = 10/18 (55%)

Query:   173 PTYHLANVVDDHLMGITH 190
             P Y   + + D L GITH
Subject: 209 PMYDFTHCISDALEGITH 226

Score = 40 (18.5 bits)
Expect = 1.3
Sum P(3) = 0.73
Identities = 8/23 (34%)
Positives = 13/23 (56%)

Query:   240 SISDLKRQGVLPEALINFCALFG 262
             +IS L+R+G    ++  FC   G
Subject: 292 TISGLRRRGYTAASIREFCKRIG 314

Accession: P47694

HYPOTHETICAL PROTEIN MG456.


Length = 334

Score = 65 (30.0 bits)
Expect = 1.9
P = 0.86
Identities = 17/59 (28%)
Positives = 30/59 (50%)

Query:    65 DKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPPSMASYDRCCAHLGEEEIKSKLAQ 123
             D    I L +   ++   S +++ DL H+ +  KP S +S  +      E+E+K KLA+
Subject: 275 DLVTNIKLQASYDFKTLNSMQKVVDLLHNKLIKKPESKSSSQKSVETEIEKEVKDKLAK 333

Accession: P02990

ELONGATION FACTOR TU (EF-TU).


Length = 393

Score = 52 (24.0 bits)
Expect = 2.1
Sum P(2) = 0.88
Identities = 12/37 (32%)
Positives = 20/37 (54%)

Query:    19 FLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPI 55
             FL + +  D + L+E  E  + E+L   +   D+TPI
Subject: 133 FLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPI 169

Score = 49 (22.6 bits)
Expect = 2.1
Sum P(2) = 0.88
Identities = 8/27 (29%)
Positives = 17/27 (62%)

Query:   447 KIAAMIDILGIKESNKRLSEGLQFLQR 473
             K+   ++I+GIKE+ K    G++  ++
Subject: 237 KVGEEVEIVGIKETQKSTCTGVEMFRK 263

Accession: P21694

ELONGATION FACTOR TU (EF-TU).


Length = 393

Score = 52 (24.0 bits)
Expect = 2.1
Sum P(2) = 0.88
Identities = 12/37 (32%)
Positives = 20/37 (54%)

Query:    19 FLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPI 55
             FL + +  D + L+E  E  + E+L   +   D+TPI
Subject: 133 FLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPI 169

Score = 49 (22.6 bits)
Expect = 2.1
Sum P(2) = 0.88
Identities = 8/27 (29%)
Positives = 17/27 (62%)

Query:   447 KIAAMIDILGIKESNKRLSEGLQFLQR 473
             K+   ++I+GIKE+ K    G++  ++
Subject: 237 KVGEEVEIVGIKETQKSTCTGVEMFRK 263

Accession: P25097

HYPOTHETICAL 15.9 KD PROTEIN IN MSP 5'REGION.


Length = 138

Score = 57 (26.3 bits)
Expect = 2.2
Sum P(2) = 0.89
Identities = 15/46 (32%)
Positives = 22/46 (47%)

Query:   291 LTKGNAKVDDKKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIY 336
             L K N K+  K L    K +    ++NP  L+ +   I P L +IY
Subject:  34 LVKSNLKIARKNLKKIEKIYDDLNLINPKQLKGINGLINPLLHTIY 79

Score = 38 (17.5 bits)
Expect = 2.2
Sum P(2) = 0.89
Identities = 7/20 (35%)
Positives = 12/20 (60%)

Query:    79 RCFCSKERLNDLRHSAMELK 98
             RC  SK ++N L+   + +K
Subject:   9 RCSSSKNKINGLKVPTVTIK 28

Accession: P33167

ELONGATION FACTOR TU (EF-TU).


Length = 396

Score = 59 (27.2 bits)
Expect = 2.9
Sum P(2) = 0.95
Identities = 14/44 (31%)
Positives = 22/44 (50%)

Query:    19 FLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPIKQSERKL 62
             FL + +  D   L+E  E  + E+L   +   D+TPI +   KL
Subject: 134 FLNKCDSVDDAELLELVEMEVRELLSKYDFPGDDTPIVKGSAKL 177

Score = 41 (18.9 bits)
Expect = 2.9
Sum P(2) = 0.95
Identities = 8/27 (29%)
Positives = 16/27 (59%)

Query:   447 KIAAMIDILGIKESNKRLSEGLQFLQR 473
             K+   I+I+GIK + K    G++  ++
Subject: 240 KVGEEIEIVGIKPTVKTTCTGVEMFRK 266

Accession: P20269

HOMEOBOX PROTEIN CEH-5 (FRAGMENT).


Length = 60

Score = 40 (18.5 bits)
Expect = 3.3
Sum P(2) = 0.96
Identities = 7/14 (50%)
Positives = 10/14 (71%)

Query:   302 KLWFFNKHFLQKRI 315
             K+WF N+   QK+I
Subject:  46 KVWFQNRRTKQKKI 59

Score = 39 (18.0 bits)
Expect = 3.3
Sum P(2) = 0.96
Identities = 7/19 (36%)
Positives = 12/19 (63%)

Query:   279 MEELETIFNLNGLTKGNAK 297
             +E+LE  FN +G   G+ +
Subject:  13 LEKLEESFNTSGYLSGSTR 31

Accession: P48025

TYROSINE-PROTEIN KINASE SYK (EC 2.7.1.112) (SPLEEN TYROSINE KINASE).


Length = 629

Score = 56 (25.9 bits)
Expect = 3.7
Sum P(2) = 0.98
Identities = 13/57 (22%)
Positives = 29/57 (50%)

Query:   307 NKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRINDF 363
             NK+  Q R +    + ELV  +   ++ +  ++ + R+  A+ +L      ++I+DF
Subject: 451 NKYLQQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDF 507

Score = 45 (20.8 bits)
Expect = 3.7
Sum P(2) = 0.98
Identities = 8/16 (50%)
Positives = 11/16 (68%)

Query:    10 LLARNTNGQFLLRLED 25
             L+   TNG+FL+R  D
Subject: 182 LIGSKTNGKFLIRARD 197

Accession: P43405

TYROSINE-PROTEIN KINASE SYK (EC 2.7.1.112) (SPLEEN TYROSINE KINASE).


Length = 635

Score = 55 (25.4 bits)
Expect = 3.7
Sum P(2) = 0.98
Identities = 13/57 (22%)
Positives = 29/57 (50%)

Query:   307 NKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRINDF 363
             NK+  Q R +    + ELV  +   ++ +  ++ + R+  A+ +L      ++I+DF
Subject: 457 NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDF 513

Score = 46 (21.2 bits)
Expect = 3.7
Sum P(2) = 0.98
Identities = 8/18 (44%)
Positives = 12/18 (66%)

Query:    10 LLARNTNGQFLLRLEDTD 27
             L+   TNG+FL+R  D +
Subject: 183 LIGSKTNGKFLIRARDNN 200

Accession: P54818

GALACTOCEREBROSIDASE PRECURSOR (EC 3.2.1.46) (GALCERASE) (GALACTOSYLCERAMIDASE) (GALACTOSYLCERAMIDE BETA-GALACTOSIDASE) (GALACTOCEREBROSIDE BETA-GALACTOSIDASE).


Length = 668

Score = 60 (27.7 bits)
Expect = 3.9
Sum P(2) = 0.98
Identities = 15/60 (25%)
Positives = 28/60 (46%)

Query:   361 NDFHDEFYYFFEKPKYNDNDAVTKFLSKNESRHIAHLLKKLGQFQEGTDAQEVESMVETM 420
             +DF+ E+  F E P + D   V ++   NE R     L+++   +  T A +  S +  +
Subject: 476 DDFNVEYPLFSEAPNFADQTGVFEYYMNNEDREHRFTLRQVLNQRPITWAADASSTISVI 535

Score = 41 (18.9 bits)
Expect = 3.9
Sum P(2) = 0.98
Identities = 8/13 (61%)
Positives = 9/13 (69%)

Query:   292 TKGNAKVDDKKLW 304
             T  NAK+  KKLW
Subject: 243 TVWNAKMSGKKLW 255

Accession: P21884

HYPOTHETICAL 27.3 KD PROTEIN IN PDHA 5'REGION (ORF5).


Length = 237

Score = 62 (28.6 bits)
Expect = 4.8
P = 0.99
Identities = 19/69 (27%)
Positives = 27/69 (39%)

Query:    52 ETPIKQSERKLIYDKYVKILLSSGKAYRCFCSKERLNDLRHSAMELKPPSMASYDRCCAH 111
             E  +  S  KL  D Y KI+  S KA       E    L + +M+              H
Subject:  77 ENQLYDSVMKLNMDDYKKIVALSNKALENVSKHEEHLKLENDSMKKSETEFEEAKTSAEH 136
Query:   112 LGEEEIKSK 120
             + E++IK K
Subject: 137 IKEKDIKEK 145

Accession: P50375

ELONGATION FACTOR TU (EF-TU) (FRAGMENT).


Length = 235

Score = 46 (21.2 bits)
Expect = 5.0
Sum P(3) = 0.99
Identities = 6/26 (23%)
Positives = 17/26 (65%)

Query:   448 IAAMIDILGIKESNKRLSEGLQFLQR 473
             +   ++++G+KE+ + +  GL+  Q+
Subject: 160 VGETVELVGLKETKETIITGLEMFQK 185

Score = 42 (19.4 bits)
Expect = 5.0
Sum P(3) = 0.99
Identities = 11/37 (29%)
Positives = 17/37 (45%)

Query:    19 FLLRLEDTDQKRLIEGAEENIYEILKWCNINYDETPI 55
             FL + +  D + L+E  E  + E L       +E PI
Subject:  45 FLNKADQVDDEELLELVELEVQETLSEYEYPGEEIPI 81

Score = 37 (17.1 bits)
Expect = 5.0
Sum P(3) = 0.99
Identities = 6/11 (54%)
Positives = 9/11 (81%)

Query:   175 YHLANVVDDHL 185
             YHL + VDD++
Subject: 111 YHLMDSVDDYI 121

Accession: P49721

PROTEASOME COMPONENT C7-I (EC 3.4.99.46) (MACROPAIN SUBUNIT C7-I) (MULTICATALYTIC ENDOPEPTIDASE COMPLEX SUBUNIT C7-I).


Length = 201

Score = 48 (22.2 bits)
Expect = 5.0
Sum P(2) = 0.99
Identities = 9/18 (50%)
Positives = 12/18 (66%)

Query:   336 YNTSTISREKVAKILLNC 353
             Y T TISRE+  ++L  C
Subject: 146 YYTPTISRERAVELLRKC 163

Score = 47 (21.7 bits)
Expect = 5.0
Sum P(2) = 0.99
Identities = 8/22 (36%)
Positives = 14/22 (63%)

Query:   163 DLILVKSDKLPTYHLANVVDDH 184
             D +LV SD++   ++  + DDH
Subject:  11 DYVLVASDRVAASNIVQMKDDH 32

Accession: P40307

PROTEASOME COMPONENT C7-I (EC 3.4.99.46) (MACROPAIN SUBUNIT C7-I) (MULTICATALYTIC ENDOPEPTIDASE COMPLEX SUBUNIT C7-I).


Length = 201

Score = 48 (22.2 bits)
Expect = 5.0
Sum P(2) = 0.99
Identities = 9/18 (50%)
Positives = 12/18 (66%)

Query:   336 YNTSTISREKVAKILLNC 353
             Y T TISRE+  ++L  C
Subject: 146 YYTPTISRERAVELLRKC 163

Score = 47 (21.7 bits)
Expect = 5.0
Sum P(2) = 0.99
Identities = 8/22 (36%)
Positives = 14/22 (63%)

Query:   163 DLILVKSDKLPTYHLANVVDDH 184
             D +LV SD++   ++  + DDH
Subject:  11 DYVLVASDRVAASNIVQMKDDH 32

Accession: P44126

HYPOTHETICAL PROTEIN HI1202.


Length = 167

Score = 61 (28.2 bits)
Expect = 5.9
P = 1.0
Identities = 11/28 (39%)
Positives = 16/28 (57%)

Query:   373 KPKYNDNDAVTKFLSKNESRHIAHLLKK 400
             +P  NDND V K+L   E  H+   L++
Subject:  55 EPLLNDNDGVVKYLRDGEDSHLLKQLRR 82

Accession: P52780

GLUTAMINYL-TRNA SYNTHETASE (EC 6.1.1.18) (GLUTAMINE--TRNA LIGASE) (GLNRS).


Length = 795

Score = 54 (24.9 bits)
Expect = 6.3
Sum P(3) = 1.0
Identities = 12/35 (34%)
Positives = 22/35 (62%)

Query:    11 LARNTNGQFLLRLEDTDQKRLIEGAEENIYEILKW 45
             LA++ NG   LR +DT+ +   +   ++I EI++W
Subject: 299 LAKDRNGGCYLRFDDTNPEAEKKEYIDHIEEIVQW 333

Score = 41 (18.9 bits)
Expect = 6.3
Sum P(3) = 1.0
Identities = 10/40 (25%)
Positives = 19/40 (47%)

Query:   173 PTYHLANVVDDHLMGITHVIRGEEWLPSTPKHIALYNAFG 212
             P+Y  A+ + D +  +TH +   E+      +  L +A G
Subject: 450 PSYDYAHCIVDSIENVTHSLCTLEFETRRASYYWLLHALG 489

Score = 39 (18.0 bits)
Expect = 6.3
Sum P(3) = 1.0
Identities = 7/19 (36%)
Positives = 14/19 (73%)

Query:   239 MSISDLKRQGVLPEALINF 257
             M+++ L+R+G+ P A+  F
Subject: 531 MTLAGLRRRGMTPTAINAF 549

Accession: P54758

TYROSINE-PROTEIN KINASE RECEPTOR EHK-2 PRECURSOR (EC 2.7.1.112) (EPH HOMOLOGY KINASE-2).


Length = 948

Score = 57 (26.3 bits)
Expect = 7.5
Sum P(2) = 1.0
Identities = 12/20 (60%)
Positives = 14/20 (70%)

Query:   310 FLQKRILNPSTLRELVDDIM 329
             FL K I NPS L  LV+DI+
Subject: 928 FLDKLIRNPSALHTLVEDIL 947

Score = 43 (19.9 bits)
Expect = 7.5
Sum P(2) = 1.0
Identities = 7/17 (41%)
Positives = 10/17 (58%)

Query:   263 WSPPRDLASKKHECFSM 279
             WSPP D   +K   +S+
Subject: 350 WSPPSDTGGRKDLTYSV 366

Accession: Q00655

TYROSINE-PROTEIN KINASE SYK (EC 2.7.1.112) (SPLEEN TYROSINE KINASE).


Length = 628

Score = 53 (24.5 bits)
Expect = 9.0
Sum P(2) = 1.0
Identities = 13/57 (22%)
Positives = 28/57 (49%)

Query:   307 NKHFLQKRILNPSTLRELVDDIMPSLESIYNTSTISREKVAKILLNCGGSLSRINDF 363
             NK+  Q R +    + ELV  +   ++ +   + + R+  A+ +L      ++I+DF
Subject: 450 NKYLQQNRHVKDKNIIELVHQVSMGMKYLEECNFVHRDLAARNVLLVTQHYAKISDF 506

Score = 45 (20.8 bits)
Expect = 9.0
Sum P(2) = 1.0
Identities = 8/16 (50%)
Positives = 11/16 (68%)

Query:    10 LLARNTNGQFLLRLED 25
             L+   TNG+FL+R  D
Subject: 178 LIGSKTNGKFLIRARD 193

Accession: Q02141

2-ISOPROPYLMALATE SYNTHASE (EC 4.1.3.12) (ALPHA-ISOPROPYLMALATE SYNTHASE) (ALPHA-IPM SYNTHETASE).


Length = 513

Score = 50 (23.1 bits)
Expect = 9.8
Sum P(2) = 1.0
Identities = 13/48 (27%)
Positives = 22/48 (45%)

Query:   125 IPFTVRFKSPERYPTFTDLLHGQINLQPQVNFNDKRYDDLILVKSDKL 172
             IP TV + +PE Y      L        ++ F+   +DDL +  ++ L
Subject: 167 IPDTVGYTTPEEYGKIFKFLIDNTKSDREIIFSPHCHDDLGMAVANSL 214

Score = 47 (21.7 bits)
Expect = 9.8
Sum P(2) = 1.0
Identities = 13/55 (23%)
Positives = 26/55 (47%)

Query:   283 ETIFNLNGLTKGNAKVDDKKLWFFNKHFLQKRILNPSTLRELVDDIMPSLESIYN 337
             ET+ NL G    N ++D  K     K+  ++  ++       VD I  +++ ++N
Subject: 381 ETVKNLAGFILDNVQIDGHKALVQLKNQEEEIYVSQGEGSGSVDAIFKAIDKVFN 435

Parameters:
  B=50
  V=500
  -ctxfactor=1.00
  E=10
  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.404    same    same    same
  Query
  Frame  MatID  Length  Eff.Length   E    S W   T  X     E2  S2
   +0      0      476       476      10. 61 3  11 22    0.19 34
Statistics:
  Query          Expected          Observed           HSPs       HSPs
  Frame  MatID  High Score        High Score       Reportable  Reported
   +0      0    65 (30.0 bits)  2504 (1155.9 bits)    123        123
  Query         Neighborhd  Word      Excluded    Failed   Successful  Overlaps
  Frame  MatID   Words      Hits        Hits    Extensions Extensions  Excluded
   +0      0     11633    20570355     4291515    16252962    25878        17
  Database:  sp.prot
    Release date:  unknown
    Posted date:  11:35 PM CDT Aug 21, 1997
  # of letters in database:  21,210,388
  # of sequences in database:  59,021
  # of database sequences satisfying E:  38
  No. of states in DFA:  576 (57 KB)
  Total size of DFA:  175 KB (192 KB)
  Time to generate neighborhood:  0.02u 0.00s 0.02t  Real: 00:00:00
  Time to search database:  33.50u 0.41s 33.91t  Real: 00:00:38
  Total cpu time:  33.55u 0.51s 34.06t  Real: 00:00:39


Copyright (C) 1997, Board of Trustees of the University of Illinois.