Accession: P26170
BACTERIOCHLOROPHYLL SYNTHASE 33 KD CHAIN.
Length = 304
Score = 163 (75.5 bits)
Expect = 5.1e-59
Sum P(5) = 5.1e-59
Identities = 32/82 (39%)
Positives = 49/82 (59%)
Query: 206 VVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDITQLSVA 265
+V++ LY++ GI +NDFK++EGDR LG++SLP +G E A I + + Q V
Subject: 181 IVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLAQALVI 240
Query: 266 GYLLASGKPYYALALVALIIPQ 287
L KPY+A A++ L+ Q
Subject: 241 TMLYLFSKPYHATAVLVLLCGQ 262
Score = 135 (62.5 bits)
Expect = 5.1e-59
Sum P(5) = 5.1e-59
Identities = 23/41 (56%)
Positives = 32/41 (78%)
Query: 77 ILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAI 117
+L ++++GP + G +Q NDW DR +DAINEP+RPIPSG I
Subject: 54 VLGIVLAGPIVCGMSQAANDWCDRHVDAINEPHRPIPSGRI 94
Score = 94 (43.5 bits)
Expect = 5.1e-59
Sum P(5) = 5.1e-59
Identities = 18/47 (38%)
Positives = 27/47 (57%)
Query: 152 FYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWWAGQAL 198
F L G ++ YS P++LK++GW G +G +Y LPW G A+
Subject: 122 FVATLLGVAAAWAYSVEPIRLKRSGWWGPGLVGLAYEGLPWITGAAV 168
Score = 79 (36.6 bits)
Expect = 5.1e-59
Sum P(5) = 5.1e-59
Identities = 15/33 (45%)
Positives = 20/33 (60%)
Query: 41 LQLTKPVTWPPLVWGVVCGAAASGNFHWTPEDV 73
L+L KPVTW P +W +CGA +S W + V
Subject: 20 LELIKPVTWFPPMWAYLCGAVSSNVPIWENKGV 52
Score = 34 (15.7 bits)
Expect = 5.1e-59
Sum P(5) = 5.1e-59
Identities = 10/49 (20%)
Positives = 20/49 (40%)
Query: 276 YALALVALIIPQIVFQFKYFLKDPVKYDVKYQASAQPFLVLGIFVTALA 324
Y V +++ + +++DP Y + V G+ +TA A
Subject: 250 YHATAVLVLLCGQFWAMSVWMRDPEGKAPWYNGTGVVMYVSGMMITAFA 298
Accession: P33326
HYPOTHETICAL PROTEIN IN C-554 GENE 3'REGION (ORF1)
(FRAGMENT).
Length = 131
Score = 148 (68.5 bits)
Expect = 3.0e-23
Sum P(2) = 3.0e-23
Identities = 31/67 (46%)
Positives = 42/67 (62%)
Query: 71 EDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLL 130
E + + +L M M+GP L G +Q +ND+ DR++DAINEP+R IPSG +S V VL
Subject: 62 ESIGRLLLGMFMAGPILCGLSQVVNDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLT 121
Query: 131 LGGLGIA 137
G IA
Subject: 122 WIGASIA 128
Score = 84 (38.9 bits)
Expect = 3.0e-23
Sum P(2) = 3.0e-23
Identities = 15/28 (53%)
Positives = 17/28 (60%)
Query: 41 LQLTKPVTWPPLVWGVVCGAAASGNFHW 68
+QL KPVTW W +CGA ASG W
Subject: 33 IQLMKPVTWFAPTWAFMCGAIASGALGW 60
Accession: P24009
PROBABLE CYTOCHROME C OXIDASE ASSEMBLY FACTOR.
Length = 305
Score = 63 (29.2 bits)
Expect = 0.0030
Sum P(3) = 0.0030
Identities = 12/39 (30%)
Positives = 22/39 (56%)
Query: 76 SILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPS 114
++L ++ + + IN+WYDRDID + E + P+
Subject: 62 TVLLTLIGSSLIIAGSCAINNWYDRDIDHLMERTKVRPT 100
Score = 46 (21.3 bits)
Expect = 0.0030
Sum P(3) = 0.0030
Identities = 10/24 (41%)
Positives = 12/24 (50%)
Query: 227 KSVEGDRALGLQSLPVAFGTETAK 250
K E RA + LPV +G E K
Subject: 206 KKTEDYRAANIPMLPVVYGFEVTK 229
Score = 39 (18.1 bits)
Expect = 0.0030
Sum P(3) = 0.0030
Identities = 9/19 (47%)
Positives = 10/19 (52%)
Query: 27 IKGASQETNKWKIRLQLTK 45
I G +ET WK L L K
Subject: 12 IDGQIEETTAWKDFLSLIK 30
Score = 35 (16.2 bits)
Expect = 0.086
Sum P(3) = 0.082
Identities = 8/26 (30%)
Positives = 14/26 (53%)
Query: 289 VFQFKYFLKDPVKYDVKYQASAQPFL 314
++Q +FL +K Y+A+ P L
Subject: 194 IWQIPHFLALAIKKTEDYRAANIPML 219
Accession: P15384
POTASSIUM CHANNEL PROTEIN KV1.3 (RGK5) (RCK3) (KV3).
Length = 525
Score = 73 (33.8 bits)
Expect = 0.096
P = 0.092
Identities = 19/64 (29%)
Positives = 30/64 (46%)
Query: 232 DRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQ 291
D + G S+P AF VG D+ +++ G ++ S + +AL +P IV
Subject: 373 DPSSGFNSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSN 432
Query: 292 FKYF 295
F YF
Subject: 433 FNYF 436
Accession: P16390
POTASSIUM CHANNEL PROTEIN KV1.3 (MK3).
Length = 528
Score = 73 (33.8 bits)
Expect = 0.096
P = 0.092
Identities = 19/64 (29%)
Positives = 30/64 (46%)
Query: 232 DRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQ 291
D + G S+P AF VG D+ +++ G ++ S + +AL +P IV
Subject: 376 DPSSGFNSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSN 435
Query: 292 FKYF 295
F YF
Subject: 436 FNYF 439
Accession: P22001
POTASSIUM CHANNEL PROTEIN KV1.3 (HPCN3) (HGK5) (HUKIII)
(HLK3).
Length = 523
Score = 72 (33.3 bits)
Expect = 0.13
P = 0.12
Identities = 19/64 (29%)
Positives = 29/64 (45%)
Query: 232 DRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQ 291
D G S+P AF VG D+ +++ G ++ S + +AL +P IV
Subject: 371 DPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSN 430
Query: 292 FKYF 295
F YF
Subject: 431 FNYF 434
Accession: P15385
POTASSIUM CHANNEL PROTEIN KV1.4 (RCK4) (RHK1).
Length = 655
Score = 72 (33.3 bits)
Expect = 0.14
P = 0.13
Identities = 19/58 (32%)
Positives = 28/58 (48%)
Query: 238 QSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
QS+P AF VG D+ ++V G ++ S + +AL +P IV F YF
Subject: 511 QSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 568
Accession: Q05037
POTASSIUM CHANNEL PROTEIN KV1.4 (BAK4).
Length = 660
Score = 72 (33.3 bits)
Expect = 0.14
P = 0.13
Identities = 19/58 (32%)
Positives = 28/58 (48%)
Query: 238 QSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
QS+P AF VG D+ ++V G ++ S + +AL +P IV F YF
Subject: 517 QSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 574
Accession: P08301
PROBABLE CYTOCHROME C OXIDASE ASSEMBLY FACTOR.
Length = 279
Score = 54 (25.0 bits)
Expect = 0.22
Sum P(3) = 0.20
Identities = 9/17 (52%)
Positives = 12/17 (70%)
Query: 89 GYTQTINDWYDRDIDAI 105
G + +N WYD DIDA+
Subject: 36 GASGALNMWYDADIDAV 52
Score = 40 (18.5 bits)
Expect = 0.22
Sum P(3) = 0.20
Identities = 7/14 (50%)
Positives = 9/14 (64%)
Query: 127 WVLLLGGLGIAGIL 140
W L GG+GI +L
Subject: 136 WALPTGGIGIESLL 149
Score = 39 (18.1 bits)
Expect = 0.22
Sum P(3) = 0.20
Identities = 6/12 (50%)
Positives = 9/12 (75%)
Query: 110 RPIPSGAISEPE 121
RP+PSG ++ E
Subject: 59 RPVPSGRVTSQE 70
Accession: Q04444
PROBABLE CYTOCHROME C OXIDASE ASSEMBLY FACTOR.
Length = 312
Score = 48 (22.2 bits)
Expect = 0.23
Sum P(3) = 0.20
Identities = 12/24 (50%)
Positives = 13/24 (54%)
Query: 227 KSVEGDRALGLQSLPVAFGTETAK 250
K VE RA G+ LPV G E K
Subject: 214 KRVEEYRAAGIPMLPVVAGFEMTK 237
Score = 47 (21.8 bits)
Expect = 0.23
Sum P(3) = 0.20
Identities = 9/22 (40%)
Positives = 15/22 (68%)
Query: 93 TINDWYDRDIDAINEPYRPIPS 114
T+N++ DRDID + E + P+
Subject: 87 TLNNYIDRDIDHLMERTKERPT 108
Score = 39 (18.1 bits)
Expect = 0.23
Sum P(3) = 0.20
Identities = 11/30 (36%)
Positives = 16/30 (53%)
Query: 129 LLLGGLGIAGILDVWAGHTTPTVFYLALGG 158
+LL GL A + ++ TTPT + L G
Subject: 118 VLLVGLAQAALGIIFLALTTPTAAVIGLIG 147
Accession: Q10252
PUTATIVE PARA-HYDROXYBENZOATE--POLYPRENYLTRANSFERASE
PRECURSOR (EC 2.5.1.-) (PHB:POLYPRENYLTRANSFERASE).
Length = 358
Score = 47 (21.8 bits)
Expect = 0.32
Sum P(3) = 0.27
Identities = 12/46 (26%)
Positives = 19/46 (41%)
Query: 254 VGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYFLKDP 299
+ A+ I L+ AG + G +Y L + +K L DP
Subject: 279 LAALQIATLATAGIMNGQGPVFYTLGVAGAAYRLSSMIYKVDLDDP 324
Score = 46 (21.3 bits)
Expect = 0.32
Sum P(3) = 0.27
Identities = 11/27 (40%)
Positives = 16/27 (59%)
Query: 110 RPIPSGAISEPEVITQVWVLLLGGLGI 136
RP+ SG +S + I+ + V L LGI
Subject: 142 RPLASGKLSVRQAISLLSVQLTASLGI 168
Score = 41 (19.0 bits)
Expect = 0.32
Sum P(3) = 0.27
Identities = 7/11 (63%)
Positives = 10/11 (90%)
Query: 94 INDWYDRDIDA 104
IND +DR++DA
Subject: 124 INDLWDRELDA 134
Accession: P08511
POTASSIUM CHANNEL PROTEIN, LATE POPULATION (SHAKER-BETA).
Length = 643
Score = 69 (31.9 bits)
Expect = 0.36
P = 0.30
Identities = 19/58 (32%)
Positives = 28/58 (48%)
Query: 238 QSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
+S+P AF VG D+T + V G ++ S + +AL +P IV F YF
Subject: 415 KSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 472
Accession: P08513
POTASSIUM CHANNEL PROTEIN, LARVAL (SHAKER-EPSILON).
Length = 656
Score = 69 (31.9 bits)
Expect = 0.36
P = 0.30
Identities = 19/58 (32%)
Positives = 28/58 (48%)
Query: 238 QSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
+S+P AF VG D+T + V G ++ S + +AL +P IV F YF
Subject: 427 KSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 484
Accession: P19024
POTASSIUM CHANNEL PROTEIN KV1.5 (KV1).
Length = 602
Score = 67 (31.0 bits)
Expect = 0.68
P = 0.50
Identities = 18/57 (31%)
Positives = 27/57 (47%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ ++V G ++ S + +AL +P IV F YF
Subject: 455 SIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 511
Accession: P22460
POTASSIUM CHANNEL PROTEIN KV1.5 (HK2) (HPCN1).
Length = 613
Score = 67 (31.0 bits)
Expect = 0.69
P = 0.50
Identities = 18/57 (31%)
Positives = 27/57 (47%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ ++V G ++ S + +AL +P IV F YF
Subject: 466 SIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 522
Accession: P16389
POTASSIUM CHANNEL PROTEIN KV1.2 (RBK2) (RCK5) (NGK1)
(MK2) (HUKIV).
Length = 499
Score = 66 (30.6 bits)
Expect = 0.93
P = 0.61
Identities = 18/64 (28%)
Positives = 28/64 (43%)
Query: 232 DRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQ 291
+R S+P AF VG D+ ++ G ++ S + +AL +P IV
Subject: 353 ERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSN 412
Query: 292 FKYF 295
F YF
Subject: 413 FNYF 416
Accession: P17658
POTASSIUM CHANNEL PROTEIN KV1.6 (HBK2).
Length = 529
Score = 66 (30.6 bits)
Expect = 0.94
P = 0.61
Identities = 18/57 (31%)
Positives = 27/57 (47%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ ++V G ++ S + +AL +P IV F YF
Subject: 408 SIPDAFWWAVVTMTTVGYGDMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 464
Accession: P17659
POTASSIUM CHANNEL PROTEIN KV1.6 (RCK2) (KV2).
Length = 530
Score = 66 (30.6 bits)
Expect = 0.94
P = 0.61
Identities = 18/57 (31%)
Positives = 27/57 (47%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ ++V G ++ S + +AL +P IV F YF
Subject: 409 SIPDAFWWAVVTMTTVGYGDMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 465
Accession: P22459
POTASSIUM CHANNEL PROTEIN KV1.4 (HK1) (HPCN2) (HUKII).
Length = 653
Score = 66 (30.6 bits)
Expect = 0.95
P = 0.61
Identities = 18/58 (31%)
Positives = 27/58 (46%)
Query: 238 QSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
QS+P AF VG D+ ++V G ++ + +AL +P IV F YF
Subject: 509 QSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGVLCAIAGVLTIALPVPVIVSNFNYF 566
Accession: P50638
POTASSIUM CHANNEL PROTEIN KV1.5.
Length = 598
Score = 68 (31.5 bits)
Expect = 1.1
Sum P(2) = 0.66
Identities = 19/74 (25%)
Positives = 32/74 (43%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYFLKD 298
S+P AF VG D+ ++V G ++ S + +AL +P IV F YF
Subject: 451 SIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHR 510
Query: 299 PVKYDVKYQASAQP 312
++ + +P
Subject: 511 ETDHEEQAALKEEP 524
Score = 34 (15.7 bits)
Expect = 1.1
Sum P(2) = 0.66
Identities = 7/12 (58%)
Positives = 9/12 (75%)
Query: 14 APAGGSSINQLL 25
APA GS++ LL
Subject: 290 APASGSTVAPLL 301
Accession: Q09470
POTASSIUM CHANNEL PROTEIN KV1.1 (HUKI).
Length = 495
Score = 65 (30.1 bits)
Expect = 1.3
P = 0.72
Identities = 17/57 (29%)
Positives = 27/57 (47%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ +++ G ++ S + +AL +P IV F YF
Subject: 358 SIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 414
Accession: P16388
POTASSIUM CHANNEL PROTEIN KV1.1 (MK1) (MBK1).
Length = 495
Score = 65 (30.1 bits)
Expect = 1.3
P = 0.72
Identities = 17/57 (29%)
Positives = 27/57 (47%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ +++ G ++ S + +AL +P IV F YF
Subject: 358 SIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 414
Accession: P10499
POTASSIUM CHANNEL PROTEIN KV1.1 (IA) (RBK1) (RCK1).
Length = 495
Score = 65 (30.1 bits)
Expect = 1.3
P = 0.72
Identities = 17/57 (29%)
Positives = 27/57 (47%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ +++ G ++ S + +AL +P IV F YF
Subject: 358 SIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 414
Accession: P15386
POTASSIUM CHANNEL PROTEIN KV1.2 (RBK2) (RCK5) (NGK1) (MK2)
(HUKIV).
Length = 499
Score = 65 (30.1 bits)
Expect = 1.3
P = 0.72
Identities = 17/57 (29%)
Positives = 26/57 (45%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ ++ G ++ S + +AL +P IV F YF
Subject: 360 SIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 416
Accession: P22739
POTASSIUM CHANNEL PROTEIN KV1.2 (XSHA2).
Length = 499
Score = 65 (30.1 bits)
Expect = 1.3
P = 0.72
Identities = 17/57 (29%)
Positives = 26/57 (45%)
Query: 239 SLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
S+P AF VG D+ ++ G ++ S + +AL +P IV F YF
Subject: 360 SIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 416
Accession: P08510
POTASSIUM CHANNEL PROTEIN, ADULT (SHAKER-ALPHA).
Length = 616
Score = 63 (29.2 bits)
Expect = 2.5
P = 0.92
Identities = 18/58 (31%)
Positives = 27/58 (46%)
Query: 238 QSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYF 295
+S+P AF VG D+T + G ++ S + +AL +P IV F YF
Subject: 427 KSIPDAFWWAVVTMTTVGYGDMTPVGFWGKIVGSLCVVAGVLTIALPVPVIVSNFNYF 484
Accession: P15387
POTASSIUM CHANNEL PROTEIN KV2.1 (DRK1).
Length = 853
Score = 60 (27.8 bits)
Expect = 6.8
P = 1.0
Identities = 23/90 (25%)
Positives = 40/90 (44%)
Query: 209 LTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYL 268
L +L+ G+ I F + + + +S+P +F T VG DI ++ G +
Subject: 329 LLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKI 388
Query: 269 LASGKPYYALALVALIIPQIVFQFKYFLKD 298
+ + ++AL IP IV F F K+
Subject: 389 VGGLCCIAGVLVIALPIPIIVNNFSEFYKE 418
Accession: P26804
ENV POLYPROTEIN PRECURSOR (CONTAINS: KNOB PROTEIN GP70;
SPIKE PROTEIN P15E; R PROTEIN).
Length = 676
Score = 46 (21.3 bits)
Expect = 7.2
Sum P(3) = 1.0
Identities = 9/21 (42%)
Positives = 12/21 (57%)
Query: 48 TWPPLVWGVVCGAAASGNFHW 68
TW P++ +C A SG HW
Subject: 70 TWWPVLTPDLCMLALSGPPHW 90
Score = 46 (21.3 bits)
Expect = 7.2
Sum P(3) = 1.0
Identities = 9/31 (29%)
Positives = 16/31 (51%)
Query: 248 TAKWICVGAIDITQLSVAGYLLASGKPYYAL 278
T + +C+G + T ++ L +GK Y L
Subject: 390 TGRGLCIGTVPKTHQALCNTTLKAGKGSYYL 420
Score = 36 (16.7 bits)
Expect = 7.2
Sum P(3) = 1.0
Identities = 9/27 (33%)
Positives = 14/27 (51%)
Query: 274 PYYALALVALIIPQIVFQFKYFLKDPV 300
P L L+ L P I+ + F+KD +
Subject: 627 PLIILLLILLFGPCILNRLVQFVKDRI 653
Accession: P32378
PARA-HYDROXYBENZOATE--POLYPRENYLTRANSFERASE PRECURSOR (EC
2.5.1.-) (PHB:POLYPRENYLTRANSFERASE).
Length = 372
Score = 47 (21.8 bits)
Expect = 8.7
Sum P(3) = 1.0
Identities = 12/40 (30%)
Positives = 18/40 (45%)
Query: 101 DIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGIL 140
D I RPI SG +S + + L G+G+ +L
Subject: 150 DQRVIRSVERPIASGRVSPRRALVFLGAQTLVGMGVLSLL 189
Score = 39 (18.1 bits)
Expect = 8.7
Sum P(3) = 1.0
Identities = 7/11 (63%)
Positives = 9/11 (81%)
Query: 93 TINDWYDRDID 103
TIND+ DR +D
Subject: 140 TINDFLDRKLD 150
Score = 37 (17.1 bits)
Expect = 8.7
Sum P(3) = 1.0
Identities = 7/10 (70%)
Positives = 8/10 (80%)
Query: 235 LGLQSLPVAF 244
LGL SLP+ F
Subject: 196 LGLASLPIVF 205
Accession: P44139
HYPOTHETICAL PROTEIN HI1253.
Length = 127
Score = 58 (26.9 bits)
Expect = 9.1
P = 1.0
Identities = 14/31 (45%)
Positives = 19/31 (61%)
Query: 267 YLLASGKPYYALALVALIIPQIVFQFKYFLK 297
YL A G ++ +A AL+I IVF K+F K
Subject: 70 YLFAFGIEWWLVAKFALLILYIVFAAKFFSK 100
Accession: P54223
CHOLINE DEHYDROGENASE (EC 1.1.99.1) (CHD).
Length = 548
Score = 59 (27.3 bits)
Expect = 9.1
P = 1.0
Identities = 10/26 (38%)
Positives = 18/26 (69%)
Query: 13 KAPAGGSSINQLLGIKGASQETNKWK 38
K G SSIN ++ ++G S++ N+W+
Subject: 81 KVIGGSSSINGMVYVRGHSEDFNRWE 106
Parameters:
B=50
H=1
V=500
-ctxfactor=1.00
E=10
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.431 same same same
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 327 327 10. 59 3 11 22 0.19 34
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 63 (29.2 bits) 163 (75.5 bits) 50 50
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 8478 14310671 3171684 11123233 15754 13
Database: sp.prot
Release date: unknown
Posted date: 11:35 PM CDT Aug 21, 1997
# of letters in database: 21,210,388
# of sequences in database: 59,021
# of database sequences satisfying E: 31
No. of states in DFA: 575 (57 KB)
Total size of DFA: 142 KB (192 KB)
Time to generate neighborhood: 0.02u 0.01s 0.03t Real: 00:00:00
Time to search database: 22.96u 0.48s 23.44t Real: 00:00:27
Total cpu time: 23.00u 0.63s 23.63t Real: 00:00:27