GENBANK:ZMCABCP29 LOCUS ZMCABCP29 1162 bp RNA PLN 08-AUG-1997 DEFINITION Z.mays mRNA for chlorophyll a/b-binding protein CP29. ACCESSION Z50801 NID g2326946 KEYWORDS apoprotein; chlorophyll a/b-binding protein; CP29 protein; precursor. SOURCE maize. ORGANISM Zea mays Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; vascular plants; seed plants; Magnoliophyta; Liliopsida; Poales; Poaceae; Zea. REFERENCE 1 (bases 1 to 1162) AUTHORS Bergantino,E. and Bassi,R. TITLE cDNA deduced amino acid sequence of maize CP29, the phosphorylatable minor antenna of photosystem II JOURNAL Unpublished REFERENCE 2 (bases 1 to 1162) AUTHORS Bergantino,E. TITLE Direct Submission JOURNAL Submitted (16-AUG-1995) Bergantino E., Universita' di Padova, Dipartimento di Biologia, Via Trieste 75, Padova, Italia, 35121 FEATURES Location/Qualifiers source 1..1162 organism="Zea mays" strain="B73" db_xref="taxon:4577" clone_lib="lambda ZAPII library of A.Barkan" transit_peptide 11..97 gene="Lhcb4*1" CDS 11..886 gene="Lhcb4*1" function="Light-harvesting complex of photosystem II" codon_start=1 evidence=experimental product="Chlorophyll a/b-binding protein CP29 precursor" db_xref="PID:e195499" db_xref="PID:g2326947" translation="MASSVAAAASTFLGTRLADPAPQNGRIVARFGFGLGGKAKPAPK KVAKTSTSSDRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPVEYLQFELDSLDQNLA KNEAGGIIGTRFESSEVKSTPLQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWL TGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYP GGSYFDPLGLAADPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLS DPLHTTIFDTFGGSS" gene 11..886 gene="Lhcb4*1" mat_peptide 98..883 gene="Lhcb4*1" function="light-harvesting complex of photosystem II" product="chlorophyll a/b-binding protein CP29, apoprotein" BASE COUNT 216 a 372 c 356 g 218 t >ZMCABCP29 ggcacgagccatggcttcatcggtggccgccgcggcgagcacattcctgggcacccgcct ggcggacccggcgccacagaacgggcgcatcgtggcccggttcgggttcgggttgggcgg caaggcgaagcctgctccgaagaaggtggcgaagacatcgacctcctctgaccggccgct gtggttccccggcgccgtggcgcccgactacctggacggctcgctggtcggcgactacgg gttcgacccgttcggtctcgggaagcccgtggagtacctgcagttcgagttggactcgct ggaccagaacctggccaagaatgaggccggcggcatcatcggcacccggttcgagtcctc cgaagtcaagtccaccccgttgcagccctacagcgaggtgttcggcctccagcggttccg cgagtgcgagctcatccacggccgctgggccatgctcgccaccctcggcgccctctccgt cgagtggctcaccggcgtcacctggcaggacgccggcaaggtggagctggtggacgggtc ctcctacctgggccagccgctgccgttctccatctcgacgctcatctggatcgaggtgct cgtgatcggctacatcgagttccagcgcaacgccgagctcgacccggagaagaggctgta ccccggcggctcctacttcgacccgctcggcctggcggccgaccctgagaagaaggagcg gctgcagctggcggagatcaagcacgcgcgcctcgccatggtcgccttcctcggcttcgc cgtgcaggccgccgccaccggcaaggggccgctcaacaactgggccacccacctgagcga cccgctccacactaccatcttcgacacgttcggagggtcctcttaagcccgccattgctc cgccccgtccatcgaccggaacgtgttcttggattaattaactacgatctctatgagcct ggggatggatcaacccgtcgtgcgtggtctcgttttgtgatgagtgggagagagaggatg acaagatcgatcctttgttaatggagatctcgttaattaggagagctaccgctgggactt ggtggtttgtaatatatgatccaaccagtgatgaatcaatgcattcacttgtgtacacat atacaaaaaaaaaaaaaaaaaa GENBANK:LECAB9 LOCUS LECAB9 2327 bp DNA PLN 13-MAY-1996 DEFINITION L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide. ACCESSION X61287 NID g19183 KEYWORDS Cab9 gene; chlorophyll a/b antenna complex; photosystem II. SOURCE tomato. ORGANISM Solanum lycopersicum Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; Magnoliopsida; Solananae; Solanales; Solanaceae; Solanum. REFERENCE 1 (bases 1 to 2327) AUTHORS Pichersky,E., Subramaniam,R., White,M.J., Reid,J., Aebersold,R. and Green,B.R. TITLE Chlorophyll a/b binding (CAB) polypeptides of CP29, the internal chlorophyll a/b complex of PSII: characterization of the tomato gene encoding the 26 kDa (type I) polypeptide, and evidence for a second CP29 polypeptide JOURNAL Mol. Gen. Genet. 227 (2), 277-284 (1991) MEDLINE 91287707 FEATURES Location/Qualifiers source 1..2327 organism="Solanum lycopersicum" db_xref="taxon:4081" clone_lib="EMBL3 genomic library" mRNA join(<325..531,817..903,1019..1069,1181..1300,1389..1523, 1712..>1972) gene="Cab9" exon <325..531 gene="Cab9" number=1 gene 325..1972 gene="Cab9" CDS join(325..531,817..903,1019..1069,1181..1300,1389..1523, 1712..1972) gene="Cab9" codon_start=1 product="Type I (26 kD) CP29 polypeptide" db_xref="PID:g19184" translation="MAAATSLYVSEMLGSPVKFSGVARPAAPSPSSSATFKTVALFKK KAAAAPAKAKAAAVSPADDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGEYGYD PFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL LDGNTLNYFGKNIPINLILAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLA KDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGQGPVENLAAHLSDPFGNNLLTVI GGASERVPTL" intron 532..816 gene="Cab9" number=1 exon 817..903 gene="Cab9" number=2 intron 904..1018 gene="Cab9" number=2 exon 1019..1069 gene="Cab9" number=3 intron 1070..1180 gene="Cab9" number=3 exon 1181..1300 gene="Cab9" number=4 intron 1301..1388 gene="Cab9" number=4 exon 1389..1523 gene="Cab9" number=5 intron 1524..1711 gene="Cab9" number=5 exon 1712..>1972 gene="Cab9" number=6 BASE COUNT 657 a 496 c 435 g 739 t >LECAB9 taaagaaagtattgtggcattgcaaattgcaatgtggatagggtcacgttatccaagtct ggtccaggagttttgcgatgcatgccatgtcagcactgtcatctgccacgtcacaaactc cttccaatcaaaacgccgcatcagattccacattcatcttccctgtggctccaataacag agcgacacttgtcacgctctcatccaccagaaaaagctttaagctagtatctccactcca aataccatcctcaattctcacttctcatcatcaactcgacctcaattttttttacctctt gccagcgacaccgtttagctacaaatggctgcagctacctctctatacgtctccgagatg ctcggaagtccggtcaagtttagcggtgttgcaaggcctgctgctccatctccatcctcc tctgctaccttcaaaactgttgcccttttcaaaaagaaggcggctgcagctcctgccaaa gctaaggctgccgctgtctcccctgctgacgatgagctcgccaagtggtacggtgagtaa cattactacctccttcccttttatgagtttgattggactcgaaatttaatgcagtagtcg tattaattgataacaagatgagtactacattttctcactttataagagaagctatttaat ttcgcacaaagttgtattaaatttaagttccctctagctgtactgtaattaatgtcaaac agaacggaagagtagagttctcctaagtccacgcagcctctgtttaacatcttccattta gtttttatatgctcttaaattttgcgaatattttcaggacctgacagaagaattttcctg cccgagggtctattggacagatcagaaatccccgagtacttgaacggagaagttcccgga gagtaagcttcgatctacttgctgcatctcgtaattttgttgataaattatattacttag catatacaaatagagaaattgtccatatatataagaattttcttgtacttgctgcagcta cggttacgatccttttggtttgagcaagaagccagaagacttcgccaagtaagtgtagta ctagtgacacattaattaattttacagctcagtcagccaactttgttcttgttgattgtg gagatggatctaagtttaaaattgttcgatctgctgcagatatcaggcatatgagctgat ccacgccagatgggctatgctcggtgctgctgggtttattatcccagaagccttcaacaa atttggtgccaactgtggtcctgaagctgtttggttcaaggtatatatatatacacacat caccactaattgcaatttgtttaaatgtgaggggaaatcctgattatgaaatttcgtctc atgtgtagactggagctttacttctagacggaaacacattgaattacttcggaaagaaca ttcccatcaaccttattcttgctgtcgtcgcagaggttgttcttgttggtggtgctgagt actacagaattattaatggcttggtgagctccccttttccttcactacaaccttcatcat aatattatgtgcattgacagttcttgtatttatgttaagaaatctacttaatatgtataa ttaaatttattcaaaactcagtaatttgcctcgatcataaaaactgacagttgattagat tgtggatttaacgaattgtgtcgggatgcaggatttggaggacaagctacacccaggtgg tccatttgacccactaggcctagcaaaggacccagaccaggcagcaatcttgaaggtaaa agaaatcaagaatggaagactagccatgttttctatgcttggtttcttcatccaagccta tgtgaccggacagggtcctgttgagaatttggctgcccatttgagtgacccctttggcaa caacttgctcaccgtcatcggtggtgcttctgaaagagtcccaaccctgtaattttcttt ttggccggcggaacgtacaattctgcaatacatttcagagctgtatgtgaaaaaccagct tgtagtttatgaagataaactgtacttattctcatacagctactactctggccacattcg tccttcattccaatttatgcagtaacattatttttttatgagtataacttatatatatcg tcattatttctaaagaaaaacacgtaatcatattcacaatgtgaggatacaatatttgtc tatacttgaaaaaacttaatttacctgtagtgaagaatttttatttgccacacaaacgtt agatgtatttaagactacaaattttaatatattaaaaatacaagctt GENBANK:HVCP29 LOCUS HVCP29 2689 bp DNA PLN 20-MAY-1992 DEFINITION Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII). ACCESSION X63052 NID g18957 KEYWORDS chlorophyll a/b-binding protein; photosystem II. SOURCE barley. ORGANISM Hordeum vulgare Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; Hordeum. REFERENCE 1 (bases 1 to 2689) AUTHORS Sorensen,A.B., Jensen,B.F. and Gausing,K. TITLE Barley (Hordeum vulgare) gene for CP29, a core chlorophyll a/b binding protein of PSII JOURNAL Plant Physiol. 98, 1538-1540 (1992) REFERENCE 2 (bases 1 to 2689) AUTHORS Gausing,K. TITLE Direct Submission JOURNAL Submitted (28-OCT-1991) K. Gausing, University of Aarhus, Department of Molecular Biology, C.F.Mollers Alle, Bldg. 130, DK-8000 Arhus, DENMARK FEATURES Location/Qualifiers source 1..2689 organism="Hordeum vulgare" strain="Bomi" db_xref="taxon:4513" tissue_type="Leaf" clone_lib="Bomi-HindIII lambda L47.1" clone="Hd512" prim_transcript 688..>2570 evidence=experimental exon 688..983 label=exon1 CDS join(776..983,1088..1172,1382..1432,1550..1670,1766..1900, 1986..2246) function="Light harvesting complex" note="Exon regions verified by sequence of full length cDNA; Transit peptide processing site is not known" codon_start=1 product="Precursor of CP29, core chlorophyll a/b binding (CAB) protein of photosystem II (PSII)" db_xref="PID:g18958" translation="MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNKK PAPKPKPAPVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYD PFGLGKKPEDFAKYQAFELIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALL LDGNTLNYFGNSIPINLILAVVAEVVLVGGAEYYRITNGLEFDDKLHPGGPFDPLGLA TDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPFENLCAHLSDPFGNNLLTVI SGAAERVPSL" intron 984..1087 label=intron1 exon 1088..1172 label=exon2 intron 1173..1381 label=intron2 exon 1382..1432 label=exon3 intron 1433..1549 label=intron3 exon 1550..1670 label=exon4 intron 1671..1765 label=intron4 exon 1766..1900 label=exon5 intron 1901..1985 label=intron5 exon 1986..2567 label=exon6 polyA_site 2436..2437 evidence=experimental polyA_site 2483 evidence=experimental polyA_site 2567..2570 evidence=experimental BASE COUNT 622 a 746 c 623 g 698 t >HVCP29 aagcttgccaccgcaacttcaaaacaaattgaaaaatggcactgagctgcaccaccatat atggctgctgctatttgctatcttagatggtgattagttggatagagactgccgtgtcac attgtaatatcccattttcaacatttgtaagtaggcttgtattcaagtagtgttctgagg taatagtagagcttgttttgaaattctggaaatgtcgaacattgtggtagttaagaaaga aagtttgaaccgatggatgctttttatgattgttgtacatgtcggaatatgttctgttac cggtgttgctcatctcatcatcatatgttaaaacttgagcctgatttggtgctgtcaaat tgtgatggaactctgggggtgtgtgtgggctgaaactcttttcttggttctctccatctc tcattggatatctgtccccatccgttatgtttggaccaattggtatcccatggctcctga taaacgagataacaagcggccctaatggcgccacatcagcaccctcatctgccaagtcag cacagcccgcccaatcaggcccaggcaacagatagccctcctgaacactgagccaatcac agcctcctcggcctatccttcacgggcccacaacatcctccaatcctcatttccaaccat ttaaactagaccacatttccctccacaatcacccatcacatcctcccttcctgctgagct gagcacgcccctctgctgcacgccccttctccctcccaaccttgggcttgaggcaatggc ggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcctccaggta tgccacagcggcgccgactgccggcgcgcagaagatcgtctccctcttcgaccgcttcaa caagaagcctgccccgaagccgaagcccgcgcccgtggccacctcgagcgccggcatcga cgacgaactcgccaagtggtacggtgagtacgaagaaatctgacggagattgcgctcttt ccaggtaacttgttcagttctgaatattcgtacatatgtatctaaatatgtcttctattt gtttcaggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtg ccggagtacctcaacggcgaggttcccggagagtaagtcataggcctcactccatttact ctacacaccatacattagtcatgctttgccacagctctgcgagagcaatcttcatagcac aagactgtttcctttagcagcatagtactccacaagctctcacatggctgaaatgctcat gtaagtaaacataagtgatatgcatctgaaccaattgcttgctttccctttggacttgca gctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagtaagtac agcagtaatctgcattttgcaagtgtggactaatctgtgaagtattctatcgaatttcag aacatattctctcgactaagcaatcctgccctacacctcgattctgcaggtaccaggcct ttgagctcatccatgccaggtgggccatgctcggcgccgccggattcatcatccccgagg cgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaaggtaattgctg aatgccgatcgtcagttttcagagcttcaggttcagaactttggaagtttgaataactca ccgtgtcataaacaacatcctgcagaccggcgccctgctccttgacggcaacaccctcaa ctacttcggcaacagcatccctatcaacctgatcctcgccgtcgtcgccgaggtcgtcct cgtcggaggcgccgagtactacaggatcaccaacggactggtcagtaccctgaagtagat gtgcgttacggcagccaggcgtacgtccttgtactgaccaacggtttcgtcaacttctcc ggcaggaattcgatgacaagctccacccaggcggcccgttcgacccgctcggcctcgcca ccgaccccgaccaggcggcgctgctcaaggtgaaggagatcaagaacggacggctggcca tgttctccatgctgggcttcttcatccaggcctacgtcaccggcgaggggcccttcgaga acctgtgcgcccacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcg ccgccgagagggtgcccagcctgtgagctggccgttgattgcccgtccgccgccgtcggc tgttgatgctcagctgcatgcgtgcgtgcgatgcagcatgatgtgctgtgtgaattttac cggggaaaagtatgagagtacgaatgtgccgtacgtgtaaattatcaagggcagaagaaa catgaccgttctgatttctgatgggagtttcggaccactgctacttgagtaatttctcaa atgttttcatcatcgttctgatttctgatgggagtttcggaccactgctacttgagtaat ttctcaaatgttttcatcatcgttaagaaccagattgactctttttgaaacttgattggt taagtccttgcatatagatagtgaacttgttattgattacattatatgcatagatagatt acgaatataatattgccgagtttgaagtgctcaaattatgcctagatct GENBANK:ATHCP33F LOCUS ATHCP33F 1066 bp mRNA PLN 06-AUG-1996 DEFINITION Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp33, partial cds. ACCESSION D31715 NID g681911 KEYWORDS cp33; chloroplast RNA-binding protein; ribonucleoprotein; single-stranded nucleic acid-binding. SOURCE Arabidopsis thaliana (strain:Columbia ecotype) cDNA to mRNA, clone:pAT33C. ORGANISM Arabidopsis thaliana Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; vascular plants; seed plants; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (sites) AUTHORS Ohta,M., Sugita,M. and Sugiura,M. TITLE Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms JOURNAL Plant Mol. Biol. 27 (3), 529-539 (1995) MEDLINE 95201246 REFERENCE 2 (bases 1 to 1066) AUTHORS Sugiura,M. TITLE Direct Submission JOURNAL Submitted (30-MAY-1994) to the DDBJ/EMBL/GenBank databases. Masahiro Sugiura, Center for Gene Research, Nagoya University; Furo-cho, Chikusa-ku, Nagoya, Aichi 464-01, Japan (Tel:052-789-3081, Fax:052-789-3081) FEATURES Location/Qualifiers source 1..1066 organism="Arabidopsis thaliana" strain="Columbia ecotype" db_xref="taxon:3702" clone="pAT33C" transit_peptide <1..195 CDS <1..966 codon_start=1 product="cp33" db_xref="PID:d1007094" db_xref="PID:g681912" translation="AVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCP NPLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQ ASGEEWRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIE EAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNL GWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVE VEGRALRLNLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA" mat_peptide 196..963 note="amino terminal acidic domain: 196-321, putative RNA-binding domain I: 322-570, putative RNA-binding domain II: 631-885." product="cp33" mutation 322 note="Nucleotide (T) at position 322 is different from the nucleotide (G) in genomic DNA sequence. This mutation is likely to be caused by PCR reaction." citation=[1] replace="g" 3'UTR 967..1066 BASE COUNT 314 a 213 c 269 g 270 t >ATHCP33F gccgtggctgtatccgccgcagccaccgcttcctccgccgctacctttaatccattactc tcctcccactccaattcccaactcttctatcgctttacaccaaaatccttcaaactcgtt gccaattgccctaatccactaatcctccactcaaatatccgccgccaccgcttcttctgc gccgccgaaaccgaagctagttccgccgatgatgaaatccaggcatcagtagaagaagaa gaagaggtagaagaagaaggagatgaaggtgaagaagaagtagaggaagaaaaacagacg acgcaagcgagtggtgaagaatggaggctttacgttgggaatttaccttacacaatcact tcttctgagctctctcagatttttggagaagctggaactgtcgtcgatgttcagattgtt tatgataaagttactgatagaagcagaggatttggatttgtaacaatgggaagcattgaa gaagctaaagaagcgatgcagatgtttaacagctctcaaattggtggtagaacggtgaaa gtgaacttcccggaggtgccgagaggcggtgagaacgaagtaatgagaaccaaaatccgt gataataaccggagttatgttgatagtcctcataaggtatatgcaggaaaccttggttgg aatctaacctcacaaggtttaaaggatgcatttggtgatcaacctggtgtgcttggtgct aaagttatctatgaaagaaatactgggaggtctagggggtttggtttcatctcgttcgag tcagcggaaaatgttcagtctgctttggctacaatgaatggcgtggaagttgaaggacga gcgctgaggctaaatttggcttcagagagagagaaacccactgtgtctcctccttccgta gaagaaggagaaaccgaggaggccagtctagagagtaacgaggtgctttcgaatgttagt gcatgaagcagcaaaagcacaatagattccggataagtttcagactgatctgctcgaggt gccaaaaatgaaaattttgttgtctttataaatgtgttgttttgtt GENBANK:ATHCP33E LOCUS ATHCP33E 3329 bp DNA PLN 10-JUL-1996 DEFINITION Arabidopsis thaliana gene for chloroplast RNA-binding protein cp33, complete cds (exon1, exon2, exon3, exon4). ACCESSION D31714 NID g681909 KEYWORDS cp33; chloroplast RNA-binding protein; ribonucleoprotein; single-stranded nucleic acid-binding. SOURCE Arabidopsis thaliana (strain:Columbia ecotype) DNA, clone_lib:lambda EMBL3 clone:lambda 93. ORGANISM Arabidopsis thaliana Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; vascular plants; seed plants; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (bases 1201 to 1856; 1955 to 2060; 2131 to 2443; 2511 to 2797) AUTHORS Ohta,M., Sugita,M. and Sugiura,M. TITLE Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms JOURNAL Plant Mol. Biol. 27 (3), 529-539 (1995) MEDLINE 95201246 REFERENCE 2 (bases 1 to 3329) AUTHORS Sugiura,M. TITLE Direct Submission JOURNAL Submitted (30-MAY-1994) to the DDBJ/EMBL/GenBank databases. Masahiro Sugiura, Center for Gene Research, Nagoya University; Furo-cho, Chikusa-ku, Nagoya, Aichi 464-01, Japan (Tel:052-789-3081, Fax:052-789-3081) FEATURES Location/Qualifiers source 1..3329 organism="Arabidopsis thaliana" strain="Columbia ecotype" db_xref="taxon:3702" clone="lambda 93" clone_lib="lambda EMBL3" exon <1417..1854 number=1 evidence=experimental CDS join(1417..1854,1957..2058,2133..2441,2513..2653) codon_start=1 product="cp33" db_xref="PID:d1007093" db_xref="PID:g681910" translation="MSSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKS FKLVANCPNPLILHSNIRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEV EEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFG FVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSP HKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSA LATMNGVEVEGRALRLNLASEREKPTVSPPSVEEGETEEASLESNEVLSNVSA" exon 1957..2058 number=2 evidence=experimental exon 2133..2441 number=3 evidence=experimental exon 2513..>2653 number=4 evidence=experimental BASE COUNT 1080 a 565 c 647 g 1037 t >ATHCP33E aagctttaaagttaataaatactaattaagcggattggtaatgaatttttagtaaaattt tggttagaaaaaaaaaaacgaaaacaaattttttcttcttctttttgtatgaatataaaa ctatattcaaaaagacgtttgcacaaaattttaatttcgattgattccattgttatttat ttttatgttggcttggattccattggtattaaggtaagtgattttagtgacaaaatggaa gaagttgctttgaagaaaaataattgaaaacaaaaaaaaaaaattgactattgtttttat tttcttacaaactatttatggatttaaaagttgttttatcaagttttagtatgatttttt ttatattatattattagtaaatttgcgagaaaaatataaagagcatggtttttttcttta cgtaaacgttcaaaattatcagtccggctctaaacatgagatagtagattctaattctcg tcatgagatcgtagattctgattgacaacaagagataggagattcctgtttacagtatga gattgtagatttcattcacaacatgacatcatagatttcaattcacaacatgaagcaaat cattaattattttcaaatgtcataccaatctcgtcttctcgaatgtttggagcttcatga ccaacctttgagtaaagagcattacaaagtcgtaatcgttttaaaaacaagttaaagatt tcgtttctttggatgattttatgaatagtataatacaaatttacacaactcaccacataa tatcctttgtatgatccaaccaatttcagatggagaaaatatagttgcatgagtatctac aatctaagacacaaagacatagatggatctaagggagactgaactcttgtataatggatt cacaatcacaagaaacaaggagagaaacacaaattgaacgttattatttccagcttaatg gacttgaagaatgaccatcatgtttgtgcctaatctgattttctccaaattctttagaat tctctctttgctaatcctgaccaatatgagaaattcaccatttttttgctcataggtgct atcaataacagtttcaagtttcaacaattcaccatttatataacattaccaacagtccaa cactagtaacataatcaccaaaatatattagtaataaattttcatcacagctttatattt ttgtgattagaaattaggatcttacagaaatctttcaaaaaaaaattcataacagttcca ttttttttggtaagattcataaaaaaattcaagttaaatgcattttataaaaatgtagga aaaactttcatcaaaaatcgttgagaagaacatacagtatatcttatccactctcttcct catccacgcggcaaaggcacaaacctctttagaaaaatgtcgtcagcttattgttcctcc gccgtggctgtatccgccgcagccaccgcttcctccgccgctacctttaatccattactc tcctcccactccaattcccaactcttctatcgctttacaccaaaatccttcaaactcgtt gccaattgccctaatccactaatcctccactcaaatatccgccgccaccgcttcttctgc gccgccgaaaccgaagctagttccgccgatgatgaaatccaggcatcagtagaagaagaa gaagaggtagaagaagaaggagatgaaggtgaagaagaagtagaggaagaaaaacagacg acgcaagcgagtggtgaagaagggaggctttacgttgggaatttaccttacacaatcact tcttctgagctctctcagatttttggagaagctggaactgtcgtcgatgttcaggttcgt ctctaatcttcatacgattctatcaatcgatttggagacagtgaagcaaaattaggatga agattgtctaattgttagcattgttctctgttgtagattgtttatgataaagttactgat agaagcagaggatttggatttgtaacaatgggaagcattgaagaagctaaagaagcgatg cagatgtttaacagctctgtaagttcacatcatttgatcaaagatgattcagcttcagaa tgtttctgatctcttgtgtgttgagtttgtagcaaattggtggtagaacggtgaaagtga acttcccggaggtgccgagaggcggtgagaacgaagtaatgagaaccaaaatccgtgata ataaccggagttatgttgatagtcctcataaggtatatgcaggaaaccttggttggaatc taacctcacaaggtttaaaggatgcatttggtgatcaacctggtgtgcttggtgctaaag ttatctatgaaagaaatactgggaggtctagggggtttggtttcatctcgttcgagtcag cggaaaatgttcagtctgctttggctacaatgaatggcgtggtaaggcttcttctccctt cttgtttggttgggtggtttgggttttgagactcactagttttggtttttaggaagttga aggacgagcgctgaggctaaatttggcttcagagagagagaaacccactgtgtctcctcc ttccgtagaagaaggagaaaccgaggaggccagtctagagagtaacgaggtgctttcgaa tgttagtgcatgaagcagcaaaagcacaatagattccggataagtttcagactgatctgc tcgaggtgccaaaaatgaaaattttgttgtctttataaatgtgttgttttgttctagtga ggctgaagaagaagacaatatatgagatagaaaaacaagagattgtttgtaatttttatt gagaatgtttttaatccataaatggtgtatgtaacaacatatcttgattccagtaaactg caaatttctgtcacgattaaatgctagtcgggtctcgtggtgcccggaaagcagagcatc tgcagcagaatctaagtcctgagggaagaagaccctgcagaaatattgacaagccatcaa gacaacgttttacgttagacagttcttcatatttctgtcatgaaattatgtgaaaccgaa aaagagaaaacatgcctgcaagtgttgtggtacaaggttgagctaacttgatttagatcg ccaagtcctttgtagccagccaccacttcaaggacttgcctggagaagaaaatgattgcc taagaattgttcgaagactgtatatgcttatggatttgacaagattttaatctagaagct acactcacctgactaaacaaggctcattacggcctttgacaagggactcttgatcatact tctcttttttcttggaaggccaagtcgac GENBANK:ATHCP31D LOCUS ATHCP31D 1035 bp mRNA PLN 10-JUL-1996 DEFINITION Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp31, partial cds. ACCESSION D31713 NID g681907 KEYWORDS cp31; chloroplast RNA-binding protein; ribonucleoprotein; single-stranded nucleic acid-binding. SOURCE Arabidopsis thaliana (strain:Columbia ecotype) leaf cDNA to mRNA, clone:pAT31C. ORGANISM Arabidopsis thaliana Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; vascular plants; seed plants; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (sites) AUTHORS Ohta,M., Sugita,M. and Sugiura,M. TITLE Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms JOURNAL Plant Mol. Biol. 27 (3), 529-539 (1995) MEDLINE 95201246 REFERENCE 2 (bases 1 to 1035) AUTHORS Sugiura,M. TITLE Direct Submission JOURNAL Submitted (30-MAY-1994) to the DDBJ/EMBL/GenBank databases. Masahiro Sugiura, Center for Gene Research, Nagoya University; Furo-cho, Chikusa-ku, Nagoya, Aichi 464-01, Japan (Tel:052-789-3081, Fax:052-789-3081) FEATURES Location/Qualifiers source 1..1035 organism="Arabidopsis thaliana" strain="Columbia ecotype" db_xref="taxon:3702" clone="pAT31C" tissue_type="leaf" CDS <1..915 codon_start=1 product="cp31" db_xref="PID:d1007092" db_xref="PID:g681908" translation="KPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPL SFSRVSLSLKTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSEGDE SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNR ETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEA ISALDGQNLEGRAIRVNVAEERPPRRGY" transit_peptide <1..198 mat_peptide 199..912 note="acidic amino-terminal domain: 199-372, putative RNA-binding domain I: 373-621, putative RNA-binding domain II: 655-903." product="cp31" 3'UTR 916..1035 BASE COUNT 259 a 236 c 263 g 277 t >ATHCP31D aagcctttagccatggccgattcttcctcttctaccattttctcccatccttccatctcc tctaccatctcttcctccagaattcgcagctccagtgtttccctccttaccggacgcatt aacctgcccctctctttctctcgcgtctctctatctcttaaaaccaaaacccaccttaaa aaatccccctttgtctccttcgttgcccagacttcggattgggctgaagaaggtggagaa ggaagcgtcgctgttgaggagaccgagaacagtttagagtcacaagatgtgagcgaagga gatgagagcgaaggagatgtgagcgaaggagctgtgagcgaaagagctgagttcccggag ccatcggaagaagccaagcttttcgtcggaaatttggcttatgatgttaatagccaagct ttggctatgctctttgagcaagccggtactgttgaaatcgccgaggttatatacaatagg gaaactgaccagagtcgtgggtttggatttgtgacaatgagttctgtggacgaagctgag acagctgtggagaagttcaaccgttatgatcttaacggacgtctactaactgtaaacaag gcagctccaagaggatcacgtccagaacgtgcgcctcgggtatatgaacctgcattcaga gtatatgtagggaatctaccatgggatgtggacaatggccgtctagaacagcttttcagt gagcatggtaaagttgtggaagctagggtggtttacgaccgtgagacaggtcgttcacgt ggattcgggtttgtcacaatgtctgacgtggatgaactcaacgaagccatctctgccctc gatggacagaacttggagggtagagcaatcagagtgaatgtagcggaagagcgtcctcca aggcgtggatattaaagctgagatctagctgtgccctctctctctccctatcttgcattg cattttgtttagacgagattcttacactcttcaacgattggtttttggctgaactctgaa tgtgaaagttaagct GENBANK:ATHCP31C LOCUS ATHCP31C 4135 bp DNA PLN 10-JUL-1996 DEFINITION Arabidopsis thaliana gene for chloroplast RNA-binding protein cp31, complete cds (exon1, exon2, exon3, exon4). ACCESSION D31712 NID g681905 KEYWORDS cp31; chloroplast RNA-binding protein; ribonucleoprotein; single-stranded nucleic acid-binding. SOURCE Arabidopsis thaliana (strain:Columbia ecotype) DNA, clone_lib:lambda EMBL3 clone:lambda 22. ORGANISM Arabidopsis thaliana Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; vascular plants; seed plants; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (bases 1201 to 1924; 2237 to 2342; 2667 to 2952; 3046 to 3276) AUTHORS Ohta,M., Sugita,M. and Sugiura,M. TITLE Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms JOURNAL Plant Mol. Biol. 27 (3), 529-539 (1995) MEDLINE 95201246 REFERENCE 2 (bases 1 to 4135) AUTHORS Sugiura,M. TITLE Direct Submission JOURNAL Submitted (30-MAY-1994) to the DDBJ/EMBL/GenBank databases. Masahiro Sugiura, Center for Gene Research, Nagoya University; Furo-cho, Chikusa-ku, Nagoya, Aichi 464-01, Japan (Tel:052-789-3081, Fax:052-789-3081) FEATURES Location/Qualifiers source 1..4135 organism="Arabidopsis thaliana" strain="Columbia ecotype" db_xref="taxon:3702" clone="lambda 22" clone_lib="lambda EMBL3" exon one-of(1340..1922,1352..1922) number=1 evidence=experimental CDS join(1428..1922,2239..2340,2669..2950,3048..3113) codon_start=1 product="cp31" db_xref="PID:d1007091" db_xref="PID:g681906" translation="MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVS LLTGRINLPLSFSRVSLSLKTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSL ESQDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGT VEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRP ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT MSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY" exon 2239..2340 number=2 evidence=experimental exon 2669..2950 number=3 evidence=experimental exon 3048..>3113 number=4 evidence=experimental BASE COUNT 1181 a 734 c 773 g 1447 t >ATHCP31C atcgattatatttgttctattattctttatatttcagtgatgccgtaacagtaagaaatt atagttaactgaaaccaacaaaaagattcagaattactggtgttattcaattatggagtt aaagttaattctttaaactttagatttgttttctgatattgcttttaagaatatgtttgt atgaatttcaaaatctctgcaatatatcttggattttgattctaatgatttactcatgaa actccaaagaggtttcatttcaaatcaattaatatacaaagattttacaagacttttagt tttgaacaacattggattttaatgaaatatttaaaatcttaattgaataacaccaaactt taaaatctattaagcatgttttacaaatatgagttccaataacactagatttaaagctgg atttagaatcattagttgaataacattggattagtgttggatttcaattctattaaaatt cattaacgaataacacccccttaaagttaactctttcaaaaccgatcataacgcacacaa gcctccaccgaaatgtttgacaccataatattttactaccgagttcgcaaggctaatatg tatttccttttgtaatttttctctttattcgtattcgagaataagtggattgttcttccg aaagttagatagatcattatgaggttgttcttagagagctagaaaactcaaaacaagttt atcaagtcgatcactctttgataaactcaacaaatagttatcattgctcattataagatt gaaaatgagactttgtattgtggaaaataaaatgcttacctcaagtgaaattttaaagtt tatgctatgatgtttgtgatttcgcaattatatgatttaatgatattaaataatcaaata aataataattcattaaaattcacatatggtttaaataggtctaaatgagtttatatgggt caaaataattttgatggttctaaatgggcttcaaatttaagtgggtttatatttacatga gtgtgtgtgtttacatgtagaggggcttacccaaattaacatccaaattaacatagagta atttccaaaatgaagtaagattaacattcaaattgtgactagaactttgatttgagttat atagactttgtgtattatttttttataatataaacttcgttttgataagtttatataaac cttgttttcgtaagagattgtgaaattttctttgcagagggacatggttattttttgtct ttggttcttgtaatgagattttaactatggtaaatctaagagcccatttgaagatgatgt ctcggccctccttatccttatctcgcccaccgttctaaaacccttcccttcctcttcttt tctcttctccttccacttccacttcttctatctctcacaattcagcaatggcttcttcta tagttacctctagcttgaagcctttagccatggccgattcttcctcttctaccattttct cccatccttccatctcctctaccatctcttcctccagaattcgcagctccagtgtttccc tccttaccggacgcattaacctgcccctctctttctctcgcgtctctctatctcttaaaa ccaaaacccaccttaaaaaatccccctttgtctccttcgttgcccagacttcggattggg ctgaagaaggtggagaaggaagcgtcgctgttgaggagaccgagaacagtttagagtcac aagatgtgagcgaaggagatgagagcgaaggagatgtgagcgaaggagctgtgagcgaaa gagctgagttcccggagccatcggaagaagccaagcttttcgtcggaaatttggcttatg atgttaatagccaagctttggctatgctctttgagcaagccggtactgttgaaatcgccg aggtgaatttagctgctttcttcttgtgctcatatggtcgtcttgatgcgtttatatgtt gttcattatgcattgcttaaggttatttatgtgtgttttgtgcattgcaatttgcatcaa ctatgagtctaatggatgagaaaagtagaattctttggcctgatgactgtgtttggagca tctctgctttgagagttagaattccgtggattgaattcatatctgttgacattatacttt tggttctctcttttttatttagttcaagagataatgttgttagtcctgacttgttctttg aattcttgtggttgtaaggttatatacaatagggaaactgaccagagtcgtgggtttgga tttgtgacaatgagttctgtggacgaagctgagacagctgtggagaagttcaaccgttat gtaagtttatatggttcaaactttcaatcatttctgtttctgagttattagcatgtattg tgatgggatattgctcctttgatttcgtcctttctgctctaagaaaacagttttctattg tctatggaatgctgttatccaaaactttctatgttactatttgtcacactttctctgttt ctatttgtcaatcgaatatggaagctttggcattttatgtgtggaattgtttttgggaaa tgagttgagttggggattctctaacatttgattctgtctgtgagaacattgctgaatatc tgtgttggtatttttcattgtgtttcaggatcttaacggacgtctactaactgtaaacaa ggcagctccaagaggatcacgtccagaacgtgcgcctcgggtatatgaacctgcattcag agtatatgtagggaatctaccatgggatgtggacaatggccgtctagaacagcttttcag tgagcatggtaaagttgtggaagctagggtggtttacgaccgtgagacaggtcgttcacg tggattcgggtttgtcacaatgtctgacgtggatgaactcaacgaagccatctctgccct cgatggacaggtaccctactcttcctcatatatggttatgctaatgcagtcaacatgatt ttgtgatgtatctcttaatcgacctttcattgtctcttgatttacagaacttggagggta gagcaatcagagtgaatgtagcggaagagcgtcctccaaggcgtggatattaaagctgag atctagctgtgccctctctctctccctatcttgcattgcattttgtttagacgagattct tacactcttcaacgattggtttttggctgaactctgaatgtgaaagttaagctgcttcta aagtaatttgtatcgcttgtttttgatgatctcttattcatagtttaattcctaattgtt ggagtttcattccctcaatcgcatcgggggatacgacacatttctgggacatgccttgtc ggtgacctttagatattagcaactacgaggtttaccccaaaatcggctgagaatgaaagg cttctatagcaaagcacaagttggtcgaggcctaagggaagaagactagaaaggtggtgt catatggtgagttagtctctgccagtctagaggttcctaaagaagaggattgggatcttc attgtgttcgtaaagggatccactattttaatctcttgattggccactctctaatccaac acttaaacaaaccacacatgaaaaataagtctaaatttaaagcttattaatatggcttac ttatttggcttaagaggcctaaactcatgtgatgtatcctagaaaaattatagatataca aaattatgtatatcacctacgtctagctgaaatcttacccaccaatgccaataaaaagtt tgccggagagaatacaagaaattcgtgtacaaatatacacgctccctctttatctttctt tcccttgttagctaagaacaaatgataaaaagcttacaccttttatgaaatgctctctca ctctcttaccctttcacccatgcccggttcttagtactgggagtgctatggcacatgacc cactatgtttttttgtaaagaaaaaatcatttatattctagctccagcttacagtcctga acttaattgatatgactcgttgaattcaaagaacaagtcaggactaacaacattatctct tgaactaaatttttttgagagaaccaaaaagtataatgtcaacagatatgaattc GENBANK:ATHCP29B LOCUS ATHCP29B 1051 bp mRNA PLN 10-JUL-1996 DEFINITION Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp29, partial cds. ACCESSION D31711 NID g681903 KEYWORDS cp29; chloroplast RNA-binding protein; ribonucleoprotein; single-stranded nucleic acid-binding. SOURCE Arabidopsis thaliana (strain:Columbia ecotype) leaf cDNA to mRNA, clone:pAT29C. ORGANISM Arabidopsis thaliana Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; vascular plants; seed plants; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (sites) AUTHORS Ohta,M., Sugita,M. and Sugiura,M. TITLE Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms JOURNAL Plant Mol. Biol. 27 (3), 529-539 (1995) MEDLINE 95201246 REFERENCE 2 (bases 1 to 1051) AUTHORS Sugiura,M. TITLE Direct Submission JOURNAL Submitted (30-MAY-1994) to the DDBJ/EMBL/GenBank databases. Masahiro Sugiura, Center for Gene Research, Nagoya University; Furo-cho, Chikusa-ku, Nagoya, Aichi 464-01, Japan (Tel:052-789-3081, Fax:052-789-3081) FEATURES Location/Qualifiers source 1..1051 organism="Arabidopsis thaliana" strain="Columbia ecotype" db_xref="taxon:3702" clone="pAT29C" tissue_type="leaf" CDS <1..981 codon_start=1 product="cp29" db_xref="PID:d1007090" db_xref="PID:g681904" translation="SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALK CSSPAEYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNV DSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGR PLRVNAGPPPPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGG YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDR DSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF" transit_peptide <1..174 mat_peptide 175..978 note="acidic amino-terminal domain: 175-270, putative RNA-binding domain I: 271-519, glycine-rich domain: 520-720, putative RNA-binding domain II: 721-969." product="cp29" 3'UTR 982..1035 BASE COUNT 231 a 245 c 283 g 292 t >ATHCP29B tctgctttcaatcctaaatcccttcctctctgcgtctccagacccgcttccgtctccgtc ttacctccttccctctccttcaaacttcactccgaccacctcgtctctatcttcgcttcc tccgccctcaaatgctcatcccccgccgagtacccgtcgcgtttcgttagaaacgttgct gtatcttcggattttgaggtggaggaagatgatatgttcgctgacggtgacgattcagcg cctgtggagcgtaactccttctctcctgaccttaagctctttgttggtaacctttctttt aacgttgatagcgctcagcttgctcagctctttgagagcgctggaaatgttgagatggtt gaggttatctatgacaaagtgactggccggagcaggggtttcggatttgtgacaatgtca accgcagcggaagttgaagcagcagctcaacagttcaatggctatgaatttgaaggcaga cctttgagagtcaatgctggccctcctccacctaaaagagaggaatccttctccagagga ccaagaagtggaggttacggttctgagcgtggtggaggttacggttccgagcgtggtggt ggttatggttccgagcgtggtggtggttatggttctcaacgtagtggtggtggttacgga gggtctcaacgttccagttatggttcggggtcagggtccggttcgggctcaggttcagga aaccgtctctacgtgggcaacctttcttggggtgttgatgacatggcacttgagaacttg tttaacgagcaaggaaaggtagttgaagctagggttatctacgacagggacagcggtaga tccaagggttttggatttgtgacacttagctcttcccaagaggttcagaaggcgatcaat tccttgaatggagcagatttggatggaagacaaataagagtctcagaggctgaggctagg ccaccaagaggccaattttgagcggtcacacctctttcatattctcaaaaaatgcaaatt ctggagggtaagaatcgcaattctcagccat GENBANK:ATHCP29A LOCUS ATHCP29A 4032 bp DNA PLN 10-JUL-1996 DEFINITION Arabidopsis thaliana gene for chloroplast RNA-binding protein cp29, complete cds (exon1, exon2, exon3, exon4). ACCESSION D31710 NID g681901 KEYWORDS cp29; chloroplast RNA-binding protein; ribonucleoprotein; single-stranded nucleic acid-binding. SOURCE Arabidopsis thaliana (strain:Columbia ecotype) DNA, clone_lib:lambda EMBL3 clone:lambda AT105. ORGANISM Arabidopsis thaliana Eukaryotae; mitochondrial eukaryotes; Viridiplantae; Charophyta/Embryophyta group; Embryophyta; vascular plants; seed plants; Magnoliophyta; Magnoliopsida; Capparales; Brassicaceae; Arabidopsis. REFERENCE 1 (bases 121 to 918; 1063 to 1168; 1575 to 2028; 2124 to 2352) AUTHORS Ohta,M., Sugita,M. and Sugiura,M. TITLE Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms JOURNAL Plant Mol. Biol. 27 (3), 529-539 (1995) MEDLINE 95201246 REFERENCE 2 (bases 1 to 4032) AUTHORS Sugiura,M. TITLE Direct Submission JOURNAL Submitted (30-MAY-1994) to the DDBJ/EMBL/GenBank databases. Masahiro Sugiura, Center for Gene Research, Nagoya University; Furo-cho, Chikusa-ku, Nagoya, Aichi 464-01, Japan (Tel:052-789-3081, Fax:052-789-3081) FEATURES Location/Qualifiers source 1..4032 organism="Arabidopsis thaliana" strain="Columbia ecotype" db_xref="taxon:3702" clone="lambda AT105" clone_lib="lambda EMBL3" misc_signal 351..354 note="GATA motif" misc_signal 364..367 note="GATA motif" TATA_signal 419..425 exon one-of(448..916,450..916) number=1 evidence=experimental CDS join(530..916,1065..1166,1577..2026,2126..2191) codon_start=1 product="cp29" db_xref="PID:d1007089" db_xref="PID:g681902" translation="MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVS IFASSALKCSSPAEYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLF VGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF NGYEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGY GSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVV EARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF " exon 1065..1166 number=2 evidence=experimental exon 1577..2026 number=3 evidence=experimental exon 2126..>2191 number=4 evidence=experimental BASE COUNT 1140 a 704 c 791 g 1397 t >ATHCP29A gatcttatcacacataccattcacttcattgaaaaattactatataacagaaaaaaaaaa ctcaattggtttgagtaactcttcttttaagctcctcaagcttactgtaaaaaaaaaagt atatttgaaatttctaaattttcaatataattatttattaatctgttttcatttcattag taaacagtaaacacaacatttatatttgtgttgtcatattttcgtacttaatgaatcaaa caataagatcaatgctatttttatattttatgtaacaaagtaacttttatttttaccaac tcttttgactgacacagattttagtaggtaaaaaaaaaatccaagtgggagatatttcaa gtggataaagattttatttttgcaaagaaaaaacgaaaagttccattttttttgccaata aatatcaaaaactggacttgttatctcgcagaacccttaaaccttatctcttcaccacca gcttctcaaagctttagcctcgagagcaaaattctctcaagctttagccatgtctgcctc tgcttcttccctctctgctttcaatcctaaatcccttcctctctgcgtctccagacccgc ttccgtctccgtcttacctccttccctctccttcaaacttcactccgaccacctcgtctc tatcttcgcttcctccgccctcaaatgctcatcccccgccgagtacccgtcgcgtttcgt tagaaacgttgctgtatcttcggattttgaggtggaggaagatgatatgttcgctgacgg tgacgattcagcgcctgtggagcgtaactccttctctcctgaccttaagctctttgttgg taacctttcttttaacgttgatagcgctcagcttgctcagctctttgagagcgctggaaa tgttgagatggttgaggtaagataaatttaggtttctgttttcagatttggattaattat ctttcttaattgggtttgaatcgttttgagtagagttaaagtgagaacatagctaaaggt ttgagattgttttcatttgtgatgaaatgagtttgatattgtaggttatctatgacaaag tgactggccggagcaggggtttcggatttgtgacaatgtcaaccgcagcggaagttgaag cagcagctcaacagttcaatggctatgtaagcagatacttgtgttcgctactgtgtcttt acttgttgataagagttttgtgtggacttgtttgtttattgagttgcttgtattgtttct tgttcttggcttgtgtgtaatgtggaattccatgaattggattgtatgaacgtttgagat agagaaatagtgttgtttatcttctgtttggtttgtggagacttcgtggttgatgttgtt ttatattctgctgataagatgcatcttcttctaggttgttcgtgtttctcatttgggata taagtagccgatttagatttgtacatttgtttttgtcacattgtcttgttgttcatacct tcaagcttgtcttttggatttcttacattactacactggctgttttcattaatcctgttg atttttaacatttcaggaatttgaaggcagacctttgagagtcaatgctggccctcctcc acctaaaagagaggaatccttctccagaggaccaagaagtggaggttacggttctgagcg tggtggaggttacggttccgagcgtggtggtggttatggttccgagcgtggtggtggtta tggttctcaacgtagtggtggtggttacggagggtctcaacgttccagttatggttcggg gtcagggtccggttcgggctcaggttcaggaaaccgtctctacgtgggcaacctttcttg gggtgttgatgacatggcacttgagaacttgtttaacgagcaaggaaaggtagttgaagc tagggttatctacgacagggacagcggtagatccaagggttttggatttgtgacacttag ctcttcccaagaggttcagaaggcgatcaattccttgaatggagcagtaagtatcatcac ttctcttctttgcataataatttattcgattggtacttcttactgtaaatatcaaatatc taactcatgtgttactttcctaaaggatttggatggaagacaaataagagtctcagaggc tgaggctaggccaccaagaggccaattttgagcggtcacacctctttcatattctcaaaa aatgcaaattctggagggtaagaatcgcaattctcagccatgttctgctatttccattct gaatcatatattgccttgcttaagacagttgaatctcgaatgtaacaggttctttgaagc atatagggttagtggaaaatggcggtttcagacagtaactaaaactcactgctggtgcac gctaggctttatccgcctttgatgcatgaaggtcgttaaggaatggtctttttttgagaa agataacaattagacttaaagcagagaacccatgtttcttgtctgttcgaatcctgcgag attggttgtagttgaagttgcattttcttcttgtcttttttgttggtattttgacacaat ttggctttttggcatatgagagtgactgtagcagtctgttttatttgatgttcgtgatct tcttatgttctgaaaaccagttttcctaaaacttaacaaatttcgatatggaacaagaaa ttttctggaagggtttgattgtgtgaggttgtattgtcagttctcatatgaacccagtgc atatgctctgggattcaaaactttatagtttggtgtaatccgtattatatatcccaattt ttattaaatgggcctaaacgctagtacaatgatggattataccgctaagagattgaaatg ggcctaaactctgagattgattcggactatattcttcaagcacggcccattgacacccct tctaattttcaacactaataccaatgtcaatacatatggtgtgcggatgtcacgtgacga tggtatcttcgacgtcattaggtgaaaaaagagaatatttatattattggtagaacgaaa aggtaagaacaaatggggcatagcaatgaccgaaagcagagaagagaaacattgaagtga agaaatggaagattatgtctcaaaaataaagaacacaagaacataaatgtcactttgctc tttcaccatcatacttccaccactcttcctgcctacaagttaggccttttactaactctt ttttcgttttgtcttcgtatatcaatcaaccaccatgaccctatacacgtatgttataga tatgacgtatattattaaggttgagtaatgttatagaggtgagtaatgttacgagtatta aacaaagtcacacactatctttatagattttaagatagattctgaaaatggtttaatcta aaatttgtctaaattaatatgtaaataccataatgaatatggtactctcaaggcagattt tggccggtcgtaattgcaagttggggcccttgttagtactacagctgcagttgatatggt cgtcatttggctcgttcattaacatcaaattaaatatgatttgttgggaatcaaaaattt ctaaccaaaaaacaattaaaataaagttatctgtctgatagaattagaaagcgaggagcc ttttcatcactgctcttctgcttcatctgtattcggcgcacacacatccataaatgcatc tatcaaatggatatataacttatttaatcacatataatatacataaaattgaattatatt aggagttttttaccttttattgtttcaattttaatttactcttaaaaataacatacacat gttaaatttgttaacaaacctgaatttaggtccgtttaacagtatcgtgaatataaataa cttttaaccgaataatataattctcttgcatctaaagagaattattgttataagatcaaa agcaaacgaggtttacttttggttatccattgttggtatatatataaccacaagtcataa ccatttgagatc PIR:S16294 >P1;S16294 chlorophyll a/b-binding protein type I precursor - tomato C;Species: Lycopersicon esculentum (tomato) C;Date: 21-Nov-1993 #sequence_revision 21-Nov-1993 #text_change 21-Nov-1993 C;Accession: S16294 R;Pichersky, E.; Subramaniam, R.; White, M.J.; Reid, J.; Aebersold, R.; Green, B.R. Mol. Gen. Genet. 227, 277-284, 1991 A;Title: Chlorophyll a/b binding (CAB) polypeptides of CP29, the internal chlorophyll a/b complex of PSII: characterization of the tomato gene encoding the 26 kDa (type I) polypeptide, and evidence for a second CP29 polypeptide. A;Reference number: S16294; MUID:91287707 A;Accession: S16294 A;Status: preliminary A;Residues: 1-286 >S16294 MAAATSLYVSEMLGSPVKFSGVARPAAPSPSSSATFKTVALFKKKAAAAPAKAKAAAVSP ADDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYE LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLILA VVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMF SMLGFFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGASERVPTL PIR:A56376 >F1;A56376 chlorophyll a/b-binding protein CP29 - maize (fragments) C;Species: Zea mays (maize) C;Date: 03-Nov-1995 #sequence_revision 03-Nov-1995 #text_change 03-Nov-1995 C;Accession: A56376 R;Bergantino, E.; Dainese, P.; Cerovic, Z.; Sechi, S.; Bassi, R. J. Biol. Chem. 270, 8474-8481, 1995 A;Title: A post-translational modification of the photosystem II subunit CP29 protects maize from cold stress. A;Reference number: A56376 A;Accession: A56376 A;Status: preliminary A;Molecule type: protein A;Residues: 1-72 C;Keywords: chlorophyll; phosphoprotein; photosystem II; thylakoid >A56376 TXTSSDRPLWFPGAVAPDYLNEAGGIIGRXFESSDVKSTPLQPYSEVFGLQRLYPGGFYF DPLGLAADPEKK PIR:S53494 >P1;S53494 RNA-binding protein cp33 precursor - Arabidopsis thaliana C;Species: Arabidopsis thaliana (mouse-ear cress) C;Date: 14-Jul-1995 #sequence_revision 21-Jul-1995 #text_change 31-Dec-1996 C;Accession: S53494; S53495; S55448 R;Ohta, M.; Sugita, M.; Sugiura, M. Plant Mol. Biol. 27, 529-539, 1995 A;Title: Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms. A;Reference number: S53490 A;Accession: S53494 A;Status: nucleic acid sequence not shown A;Molecule type: DNA A;Residues: 1-329 A;Cross-references: EMBL:D31714 A;Accession: S53495 A;Status: nucleic acid sequence not shown A;Molecule type: mRNA A;Residues: 9-329 A;Cross-references: EMBL:D31715 R;Sugiura, M. submitted to the EMBL Data Library, May 1994 A;Reference number: S55447 A;Accession: S55448 A;Molecule type: mRNA A;Residues: 9-115,'W',117-329 A;Cross-references: EMBL:D31715 C;Genetics: A;Gene: cp33 A;Genome: nuclear A;Introns: 146/3; 180/3; 283/3 C;Superfamily: ribonucleoprotein repeat homology C;Keywords: chloroplast; RNA binding F;1-73/Domain: transit peptide (chloroplast) #status predicted F;74-329/Product: RNA-binding protein cp33 #status predicted F;117-184/Domain: ribonucleoprotein repeat homology F;220-287/Domain: ribonucleoprotein repeat homology >S53494 MSSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHSN IRRHRFFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYV GNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSS QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFG DQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK PTVSPPSVEEGETEEASLESNEVLSNVSA PIR:S53492 >P1;S53492 RNA-binding protein cp31 precursor - Arabidopsis thaliana C;Species: Arabidopsis thaliana (mouse-ear cress) C;Date: 14-Jul-1995 #sequence_revision 21-Jul-1995 #text_change 31-Dec-1996 C;Accession: S53492; S53493; S55447 R;Ohta, M.; Sugita, M.; Sugiura, M. Plant Mol. Biol. 27, 529-539, 1995 A;Title: Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms. A;Reference number: S53490 A;Accession: S53492 A;Status: nucleic acid sequence not shown A;Molecule type: DNA A;Residues: 1-314 A;Cross-references: EMBL:D31712 A;Accession: S53493 A;Status: nucleic acid sequence not shown A;Molecule type: mRNA A;Residues: 11-223,'TFQ',227,'T',229-314 A;Cross-references: EMBL:D31713 R;Sugiura, M. submitted to the EMBL Data Library, May 1994 A;Reference number: S55447 A;Accession: S55447 A;Molecule type: mRNA A;Residues: 11-314 A;Cross-references: EMBL:D31713 C;Genetics: A;Gene: cp31 A;Genome: nuclear A;Introns: 165/3; 199/3; 293/3 C;Superfamily: ribonucleoprotein repeat homology C;Keywords: chloroplast; RNA binding F;1-76/Domain: transit peptide (chloroplast) #status predicted F;77-314/Product: RNA-binding protein cp31 #status predicted F;136-203/Domain: ribonucleoprotein repeat homology F;230-297/Domain: ribonucleoprotein repeat homology >S53492 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS LSLKTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDVSEG AVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF VTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDV DNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAI RVNVAEERPPRRGY PIR:S53490 >P1;S53490 RNA-binding protein cp29 precursor - Arabidopsis thaliana C;Species: Arabidopsis thaliana (mouse-ear cress) C;Date: 14-Jul-1995 #sequence_revision 21-Jul-1995 #text_change 31-Dec-1996 C;Accession: S53490; S53491 R;Ohta, M.; Sugita, M.; Sugiura, M. Plant Mol. Biol. 27, 529-539, 1995 A;Title: Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms. A;Reference number: S53490 A;Accession: S53490 A;Status: nucleic acid sequence not shown A;Molecule type: DNA A;Residues: 1-334 A;Cross-references: EMBL:D31710 A;Accession: S53491 A;Status: nucleic acid sequence not shown A;Molecule type: mRNA A;Residues: 9-334 A;Cross-references: EMBL:D31711 C;Genetics: A;Gene: cp29 A;Genome: nuclear A;Introns: 129/3; 163/3; 313/3 C;Superfamily: ribonucleoprotein repeat homology C;Keywords: chloroplast; RNA binding F;1-66/Domain: transit peptide (chloroplast) #status predicted F;67-334/Product: RNA-binding protein cp29 #status predicted F;100-167/Domain: ribonucleoprotein repeat homology F;250-317/Domain: ribonucleoprotein repeat homology >S53490 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFE SAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPK REESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSG SGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSS QEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF PIR:S33443 >P1;S33443 chlorophyll a/b-binding protein CP29 - Arabidopsis thaliana N;Alternate names: light-harvesting complex protein C;Species: Arabidopsis thaliana (mouse-ear cress) C;Date: 13-Jan-1995 #sequence_revision 13-Jan-1995 #text_change 10-Feb-1995 C;Accession: S33443 R;Green, B.R.; Pichersky, E. submitted to the EMBL Data Library, May 1993 A;Description: Nucleotide sequence of Arabidopsis thaliana Lhcb4 gene. A;Reference number: S33443 A;Accession: S33443 A;Molecule type: DNA A;Residues: 1-290 A;Cross-references: EMBL:X71878 C;Genetics: A;Gene: LHCB4 A;Introns: 171/3 C;Keywords: chlorophyll; light-harvesting complex; photosystem II; thylakoid >S33443 MAATSAAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYP GAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAK STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL GQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQL AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS PIR:S21386 >P1;S21386 chlorophyll a/b-binding protein CP29 precursor - barley C;Species: Hordeum vulgare (barley) C;Date: 20-Feb-1995 #sequence_revision 20-Feb-1995 #text_change 12-Apr-1995 C;Accession: S21386 R;Sorensen, A.B.; Jensen, B.F.; Gausing, K. submitted to the EMBL Data Library, October 1991 A;Description: Barley (Hordeum vulgare) gene for CP29, a core chlorophyll a/b binding protein of PSII. A;Reference number: S21386 A;Accession: S21386 A;Status: preliminary A;Molecule type: DNA A;Residues: 1-286 A;Cross-references: EMBL:X63052 C;Genetics: A;Introns: 70/1; 98/2; 115/2; 155/3; 200/3 C;Superfamily: chlorophyll a/b-binding protein >S21386 MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNKKPAPKPKPAPVATSSAG IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFE LIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLILA VVAEVVLVGGAEYYRITNGLEFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMF SMLGFFIQAYVTGEGPFENLCAHLSDPFGNNLLTVISGAAERVPSL TREMBL:Q07473 ID Q07473 PRELIMINARY; PRT; 290 AA. AC Q07473; DT 01-NOV-1996 (TREMBLREL. 01, CREATED) DT 01-NOV-1996 (TREMBLREL. 01, LAST SEQUENCE UPDATE) DT 01-NOV-1996 (TREMBLREL. 01, LAST ANNOTATION UPDATE) DE CP29 PROTEIN. GN LHCB4. OS ARABIDOPSIS THALIANA (MOUSE-EAR CRESS). OC EUKARYOTA; PLANTA; EMBRYOPHYTA; ANGIOSPERMAE; DICOTYLEDONEAE; OC CAPPARALES; CRUCIFERAE. RN [1] RP SEQUENCE FROM N.A. RC STRAIN=COLUMBIA; RX MEDLINE; 94120013. RA GREEN B.R., PICHERSKY E.; RL PLANT PHYSIOL. 103:1451-1452(1993). DR EMBL; X71878; G298036; -. SQ SEQUENCE 290 AA; 31139 MW; 8D2E5A5D CRC32; >Q07473 MAATSAAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYP GAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAK STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL GQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQL AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS TREMBL:Q00321 ID Q00321 PRELIMINARY; PRT; 286 AA. AC Q00321; DT 01-NOV-1996 (TREMBLREL. 01, CREATED) DT 01-NOV-1996 (TREMBLREL. 01, LAST SEQUENCE UPDATE) DT 01-NOV-1996 (TREMBLREL. 01, LAST ANNOTATION UPDATE) DE CHLOROPHYLL A-B BINDING PROTEIN OF LHCII TYPE I PRECURSOR (CP29). GN CAB9. OS LYCOPERSICON ESCULENTUM (TOMATO). OC EUKARYOTA; PLANTA; EMBRYOPHYTA; ANGIOSPERMAE; DICOTYLEDONEAE; OC SOLANALES; SOLANACEAE. RN [1] RP SEQUENCE FROM N.A. RX MEDLINE; 91287707. RA PICHERSKY E., SUBRAMANIAM R., WHITE M.J., REID J., AEBERSOLD R., RA GREEN B.R.; RL MOL. GEN. GENET. 227:277-284(1991). CC -!- FUNCTION: THE LIGHT-HARVESTING COMPLEX (LHC) FUNCTIONS AS A LIGHT CC RECEPTOR, IT CAPTURES & DELIVERS EXCITATION ENERGY TO PHOTOSYSTEMS CC WITH WHICH IT IS CLOSELY ASSOCIATED. THE N-TERMINAL OF THE PROTEIN CC EXTENDS INTO THE STROMA WHERE IT IS INVOLVED WITH ADHESION OF CC GRANAL MEMBRANES AND PHOTOREGULATED BY REVERSIBLE PHOSPHORYLATION CC OF ITS THREONINE RESIDUES; BOTH ARE BELIEVED TO MEDIATE THE CC DISTRIBUTION OF EXCITATION ENERGY BETWEEN PHOTOSYSTEMS I AND II. CC -!- SUBUNIT: THE LHC COMPLEX CONSISTS OF CHLOROPHYLLS (A & B) AND CC CHLOROPHYLL A-B BINDING PROTEINS. CC -!- SUBCELLULAR LOCATION: CHLOROPLAST THYLAKOID MEMBRANE. DR EMBL; X61287; G19184; -. KW CHLOROPHYLL; PHOTOSYNTHESIS; PHOTOSYSTEM I; PHOTOSYSTEM II; KW THYLAKOID MEMBRANE; CHLOROPLAST; TRANSIT PEPTIDE; MULTIGENE FAMILY; KW TRANSMEMBRANE; PHOSPHORYLATION. FT TRANSIT 1 ? CHLOROPLAST. FT CHAIN ? 286 CHLOROPHYLL A-B BINDING PROTEIN. FT TRANSMEM 129 140 POTENTIAL. FT TRANSMEM 173 193 POTENTIAL. FT TRANSMEM 237 257 POTENTIAL. SQ SEQUENCE 286 AA; 30537 MW; BE10B87E CRC32; >Q00321 MAAATSLYVSEMLGSPVKFSGVARPAAPSPSSSATFKTVALFKKKAAAAPAKAKAAAVSP ADDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGEYGYDPFGLSKKPEDFAKYQAYE LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLILA VVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMF SMLGFFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGASERVPTL TREMBL:Q43349 ID Q43349 PRELIMINARY; PRT; 334 AA. AC Q43349; DT 01-NOV-1996 (TREMBLREL. 01, CREATED) DT 01-NOV-1996 (TREMBLREL. 01, LAST SEQUENCE UPDATE) DT 01-NOV-1996 (TREMBLREL. 01, LAST ANNOTATION UPDATE) DE CP29. OS ARABIDOPSIS THALIANA (MOUSE-EAR CRESS). OC EUKARYOTA; PLANTA; EMBRYOPHYTA; ANGIOSPERMAE; DICOTYLEDONEAE; OC CAPPARALES; CRUCIFERAE. RN [1] RP SEQUENCE FROM N.A. RC STRAIN=COLUMBIA; TISSUE=LEAF; RX MEDLINE; 95201246. RA OHTA M., SUGITA M., SUGIURA M.; RL PLANT MOL. BIOL. 27:529-539(1995). DR EMBL; D31710; G681902; -. DR EMBL; D31711; G681904; -. KW CHLOROPLAST; RIBONUCLEOPROTEIN. SQ SEQUENCE 334 AA; 35243 MW; AB02AE09 CRC32; >Q43349 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFE SAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPK REESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSG SGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSS QEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF TREMBL:Q40039 ID Q40039 PRELIMINARY; PRT; 286 AA. AC Q40039; DT 01-NOV-1996 (TREMBLREL. 01, CREATED) DT 01-NOV-1996 (TREMBLREL. 01, LAST SEQUENCE UPDATE) DT 01-NOV-1996 (TREMBLREL. 01, LAST ANNOTATION UPDATE) DE PRECURSOR OF CP29, CORE CHLOROPHYLL A/B BINDING (CAB) PROTEIN OF DE PHOTOSYSTEM II (PSII). OS HORDEUM VULGARE (BARLEY). OC EUKARYOTA; PLANTA; EMBRYOPHYTA; ANGIOSPERMAE; MONOCOTYLEDONEAE; OC CYPERALES; GRAMINEAE. RN [1] RP SEQUENCE FROM N.A. RC STRAIN=BOMI; TISSUE=LEAF; RA SORENSEN A.B., JENSEN B.F., GAUSING K.; RL PLANT PHYSIOL. 98:1538-1540(1992). DR EMBL; X63052; G18958; -. KW PHOTOSYSTEM II; CHLOROPHYLL. SQ SEQUENCE 286 AA; 30744 MW; 9B7A4C59 CRC32; >Q40039 MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNKKPAPKPKPAPVATSSAG IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFE LIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLILA VVAEVVLVGGAEYYRITNGLEFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMF SMLGFFIQAYVTGEGPFENLCAHLSDPFGNNLLTVISGAAERVPSL